Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1304 ATGGGCACTGAAACAACCCAAACCAACGCTATTACAAATGGTGAACCTCACAAGCAAGATGCTCCACTGAAAAGGACTAGGCTGCAAAAGGAGTTAACTTTTCAAGACATATATGAAAACGAAGACATGTTTGATGATGATGATGAAGATGACAGTGATTGGGACCCGTTTGCGTTGGAAAAGTGTGTGGAACCCATCAAGTGGTTCTGCATTAATTGTACCATGCTTAACCTCAATGATACTGTCCATTGTTATGTATGTGGGGAGCATAAAGATTCTAAAATCTTGACCTGTGGGTTTTTCGCATCTCCCTCTGCAGAAGAAGATTGTCTTACTGAGGTCCAGCCAAAAACAAAAGGACCAACAGATCTTGGCACACAGGATTCAGCGACAAATTGTTCTACAGCAATTGGCTTTGATGAGAGAATGTTGCTACATGCAGAAGTTGAAATGAAACCACATCCACACCCTGAAAGGCCAGATCGTCTTCGAGCCATTGCTGCTAGCCTTGCTACAGCTGGTATATTTCCTGGAAGATGCTATTCAATTCCTGCCAGAGAAATCACAATGGAGGAACTTATTACGGTTCATACCTCGGAGCATATTAAATCTGTTGAAGCTACAAGCGGTGCACTTTGTAGTTATTTCACTCCTGACACATATGCCAATGAGCATTCAGCACATGCTGCTAGGTTGGCAGCTGGGTTATGTGCTGATCTGGCATCAGCAGTTGTTTCTGGGCGTGCCAAAAATGGATTTGCTTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTAAGAGATGCGATGGGCTTCTGCCTTCATAATAATGCTGCAGTGGCAGCATTAGCAGCACAGGCTGCTGGGGCTAGGAAGGTGTTAATTTTAGATTGGGATGTTCATCACGGAAATGGGACTCAGGAAATATTTGACCAAAACAAATCGGTCTTATATATATCGTTGCATAGACATGAGCGTGGAAAGTTTTATCCCGGCACTGGAGCTGTTGATGAGGTAGGTAGTAAGGGTGCAGAAGGATACTGTGTTAATATTCCATGGAATCAAGGAGGAGTTGGCGATAATGATTACATTTTTGCATTTCAGCATGTGGTCCTTCCTGTAGCTTCTGAGTTTGCTCCTGATCTCACCATAATATCAGCCGGATTTGATGCTGCTAGAGGTGACCCGTTAGGATGTTGTGATGTTACTCCTGCTGGCTATGCACAGATGACATACATGTTGAATGCTCTTTCTGGTGGAAAATTGCTTGTTATTCTTGAGGGGGGTTACAATCTTCGTTCTATATCATCTTCTGCAACTTCAGTAATCAAGGTATTGCTAGGTGAGAGTCCTGGATATGAACTGGAAAATAGTTCCCCTTCCAAATCTGGCCTGCAAACTATTCTGGAAGTCCTCAAAATTCAGAAGAACTTTTGGCCTTCCTTGGGACCCATCTTTATAAATTTGTTATCACATTGGAAAACATACTGTCTTGAGAAAAAAAGAAAACATATTAAGAGACGCCGAGTTCAGGCACCATTTTGGTGGAGGTGGGGCCGAAAGAGATTGCTATACCATTACCTGAATGGCTATCTTCGTGCAAGATCAAAGTGA 1611 0.4308 MGTETTQTNAITNGEPHKQDAPLKRTRLQKELTFQDIYENEDMFDDDDEDDSDWDPFALEKCVEPIKWFCINCTMLNLNDTVHCYVCGEHKDSKILTCGFFASPSAEEDCLTEVQPKTKGPTDLGTQDSATNCSTAIGFDERMLLHAEVEMKPHPHPERPDRLRAIAASLATAGIFPGRCYSIPAREITMEELITVHTSEHIKSVEATSGALCSYFTPDTYANEHSAHAARLAAGLCADLASAVVSGRAKNGFALVRPPGHHAGVRDAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFDQNKSVLYISLHRHERGKFYPGTGAVDEVGSKGAEGYCVNIPWNQGGVGDNDYIFAFQHVVLPVASEFAPDLTIISAGFDAARGDPLGCCDVTPAGYAQMTYMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGESPGYELENSSPSKSGLQTILEVLKIQKNFWPSLGPIFINLLSHWKTYCLEKKRKHIKRRRVQAPFWWRWGRKRLLYHYLNGYLRARSK 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1304 536 PANTHER HISTONE DEACETYLASE-RELATED 16 532 - -
Lal7g1304 536 PRINTS Histone deacetylase superfamily signature 258 281 IPR000286 -
Lal7g1304 536 PRINTS Histone deacetylase superfamily signature 291 306 IPR000286 -
Lal7g1304 536 PRINTS Histone deacetylase superfamily signature 379 389 IPR000286 -
Lal7g1304 536 SUPERFAMILY Arginase/deacetylase 132 479 IPR023696 -
Lal7g1304 536 MobiDBLite consensus disorder prediction 1 15 - -
Lal7g1304 536 ProSitePatterns Zinc finger RanBP2-type signature. 68 87 IPR001876 -
Lal7g1304 536 MobiDBLite consensus disorder prediction 1 24 - -
Lal7g1304 536 PANTHER HISTONE DEACETYLASE 16 532 - -
Lal7g1304 536 Gene3D Histone deacetylase domain 128 501 IPR037138 -
Lal7g1304 536 CDD HDAC_classII 156 446 - -
Lal7g1304 536 Pfam Histone deacetylase domain 156 444 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1304 Lal-Chr7 18400440 18408099 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1304 - - gmx:100804724 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1304 7 18400440 18408099 Lal7g1304 7 18400440 18408099 ECH
Lal14g1860 14 18135543 18144851 Lal7g1304 7 18400440 18408099 LSH