Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1105 ATGGATTTTTCTCGTGAAACTGGTGAAAAGTGGAAGAGAATCATGTCCATTTCTATCAGAGATTTGGATCCAGCTTTCAAGGGAACTGGACAAAAGGCGGGACTTGAAATATGGCGAATTGAGAATTTTAATCCGGTTCCCATCCCTCAGTCATCTTATGGGAAGTTTTTCACCGGAGACTCCTACGTGATTTTAAAGACAACTGGTACAAAAAGTGGTGCTCTCCTCCACAATATCCATTACTGGCTCGGTAAAGACACCACTCAGGACGAGGCTGGAGCTGCAGCCATCAAGACAGTAGAATTGGATGCAACTCTAGGAGGACGTGCTGTTCAGTATCGCGAAGTACAGGGTCATGAAACTGAAAAGTTCCTGTCTTATTTCAAACCATGTATTATACCTCAAGAAGGTGGAGCTGCCTCTGGTTTTAAACATGTTGAGGCTGAAGAACATAAGACGCGATTGTTTGTTCCTTTTGCCCGATCTTCACTCAGCCATGATGATATTTTTATTCTGGATACTGATTCCAAAATCTTCCAATTTAATGGTTCCAATTCATCCATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTACAGTATATTAAGGACACATACCATGATGGGAAATGTGATATAGCTGCTGTTGAGGATGGAAGGTTGATGTCTGATTCTGATACTGGAGAATTCTGGAGTTTCTTTGGAGGTTTTGCTCCTCTTCCACGGAAAACGGTCAACGATGACGATAAGCCTGCTGATTCTCATCCTCCAAAGCTGTTTGTTGTGACAGGGAAGGCAGAACCTATTGAGTTTGATTCTTTGACAAGGGAATTACTGGACACAAATAAATGCTATATTATAGATTGTGGGTTGGAATTGTTTGCATGGATAGGAAGAAACTCCTCTCTAGATGAAAGAAAAAGTGCTAGTAGCGCTGCAGAGGAGTTAGTCAGTGGCACTGGTCGATCAAAATCCTACGTAATTCGCGTGATGGAAGGATTTGAAACTGTGATGTTCAAGTCCAAGTTTGACTCTTGGCCTCAAACAACAAATGTAGCACATGCTGAAGATGGTCGTAGCAAGGTAGCAGAACGTCTAAAACGTCAAGGATTGGACGTCAAGGGTCTCTTGAAAGCTGATCCTGAAAAAGAAGAACCTGAAGCCTACATAGATTGCACAGGAAATTTGCGGGTTTGGCGAGTGAATGGTCAGGAAAAGGTTCTTCTTCCAGCCTCTGACCAGTCAAAATTTTATAGTGGCGATTGCTACATCTTTCAGTATTCATATCCTGGAGAAGATAGGGAAGACCATCTTATAGGAGCATGGATTGGAAACAATAGTGTTGAGGAAGATAGAGCTTCAGCTCTTTCAATGGCAGGCAAAATGGTTGAATCAATGAAGTTTATTCCTTCCCTGGCTCGTATTTATGAAGGCAGTGAACCAATTCAATTTCAGTATATTCTCCAAAGCTTCATTGTCTACAAGGGTGGACTTAGTGATGGATACAAGAATTACATTGCGGAAAAGGAAATACCGGATGAGACATACAATGAGGAGGGCGTTGCATTATTCCGCATCCAAGGCTCTGGACCCGAAAATATGCAAGCCATACAAACTGAACCAGTTGCTTCCTCCTTGAATTCTGCTTACTGCTACATACTACATGATGGGCCTACTGTCTTTTCTTGGTCGGGAAGTTTTACAACTGCAGATGACCAGGAACTTGTGGAGAGAATGTTGGATTTGATAAAGCCGGATTTACAATGCAAACTACAAAAGGAAGGTACAGAATCTGAAAAGTTTTGGGAGATATTAGGAGGAAAAACAGAATATCCGAGTAAAAAGATTGTGAAGGATGCTGAAAATGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGGTAATGATGTGAAAGAGATATACAACTTTTCCCAGGATGATTTGATGACGGAAGATATTTTCATCTTGGATATTCACTCAGAAATCTTTGTATGGATTGGCCAGCAGTTTGATCCCAAAAATAGATTGCAGGCTTTAACGATTGGCGAGAAATTTCTTGAGCATGATTTTCTTCAAGAAAAAGTATCTTGTGTAGCTCCAATATATGTTGTCATGGAAGACAGTGAGCCACCTTTCTTCACCCGCTTCTTTAAATGGGAGTCAGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTTACAATTGTGAAAAATGGTGGTACTCTTCCTTTGGATAAACCAAAAAGAAGAGCATCTGTATCTTCTGGGGGAAGGTCTAGTAGTCTTCCCGAAAAATCTCAGCGTTCGCGCAGCGTGTCTGTCAATCCTGATCGTGCTCGTGTTCGGGGAAGATCTCCAGCCTTTACTGCACTAACAGCTAATTTTGAGAATCCTAAAGACAGAAACCTTTCAACTCCACCTCCAATGGTTACAAAACTGTATCCAAAATCTATGACACCGGATTCAATTAAACCGGGTCCTAAAGCCGCTGCAGCCATATCTCACCTTACTTCTACTTTTGAACAACCACCATCAGCACGAGATAGTTTGATACCGCGGTCATTGAGAGATGCCTCTAAATCAAGCATCAATAAAAATGAGCAGGAGGAGAATTCTATGAACAGCATAATAGAATCTCTTACTATACAAGAAGATGTGAAAGGTGGTGAAGCTGAAGATGATGAAGGCCTTCCAGTCTATCCATATGATCAAGTTAATACAGAATCTGGAGACCCTGCAACAGACATTGATGTGACTAAAAGAGAGGCTTATCTATCAGTGGAGGAGTTCAAAGAGAAACTTGGGATGGCTAAGAATGAATTTTATAAGTTGCCAAAATGGAAACAGAACAAACTCAAAATGGCTGTTCAATTGTTCTGA 2883 0.4117 MDFSRETGEKWKRIMSISIRDLDPAFKGTGQKAGLEIWRIENFNPVPIPQSSYGKFFTGDSYVILKTTGTKSGALLHNIHYWLGKDTTQDEAGAAAIKTVELDATLGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGAASGFKHVEAEEHKTRLFVPFARSSLSHDDIFILDTDSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCDIAAVEDGRLMSDSDTGEFWSFFGGFAPLPRKTVNDDDKPADSHPPKLFVVTGKAEPIEFDSLTRELLDTNKCYIIDCGLELFAWIGRNSSLDERKSASSAAEELVSGTGRSKSYVIRVMEGFETVMFKSKFDSWPQTTNVAHAEDGRSKVAERLKRQGLDVKGLLKADPEKEEPEAYIDCTGNLRVWRVNGQEKVLLPASDQSKFYSGDCYIFQYSYPGEDREDHLIGAWIGNNSVEEDRASALSMAGKMVESMKFIPSLARIYEGSEPIQFQYILQSFIVYKGGLSDGYKNYIAEKEIPDETYNEEGVALFRIQGSGPENMQAIQTEPVASSLNSAYCYILHDGPTVFSWSGSFTTADDQELVERMLDLIKPDLQCKLQKEGTESEKFWEILGGKTEYPSKKIVKDAENDPHLFSCNFSKGNDVKEIYNFSQDDLMTEDIFILDIHSEIFVWIGQQFDPKNRLQALTIGEKFLEHDFLQEKVSCVAPIYVVMEDSEPPFFTRFFKWESAKSAMLGNSFQRKLTIVKNGGTLPLDKPKRRASVSSGGRSSSLPEKSQRSRSVSVNPDRARVRGRSPAFTALTANFENPKDRNLSTPPPMVTKLYPKSMTPDSIKPGPKAAAAISHLTSTFEQPPSARDSLIPRSLRDASKSSINKNEQEENSMNSIIESLTIQEDVKGGEAEDDEGLPVYPYDQVNTESGDPATDIDVTKREAYLSVEEFKEKLGMAKNEFYKLPKWKQNKLKMAVQLF 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1105 960 SMART VHP_1 925 960 IPR003128 GO:0003779|GO:0007010
Lal7g1105 960 Gene3D Severin 249 362 IPR029006 -
Lal7g1105 960 MobiDBLite consensus disorder prediction 856 882 - -
Lal7g1105 960 PRINTS Gelsolin family signature 324 345 IPR007122 GO:0051015
Lal7g1105 960 PRINTS Gelsolin family signature 412 428 IPR007122 GO:0051015
Lal7g1105 960 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Lal7g1105 960 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Lal7g1105 960 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Lal7g1105 960 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Lal7g1105 960 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Lal7g1105 960 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Lal7g1105 960 CDD gelsolin_S1_like 26 138 - -
Lal7g1105 960 SUPERFAMILY Actin depolymerizing proteins 149 242 - -
Lal7g1105 960 SUPERFAMILY Actin depolymerizing proteins 23 156 - -
Lal7g1105 960 CDD gelsolin_S6_like 622 718 - -
Lal7g1105 960 PANTHER VILLIN 15 960 IPR007122 GO:0051015
Lal7g1105 960 Gene3D Severin 21 145 IPR029006 -
Lal7g1105 960 SMART VILL_6 623 719 IPR007122 GO:0051015
Lal7g1105 960 SMART VILL_6 33 131 IPR007122 GO:0051015
Lal7g1105 960 SMART VILL_6 141 236 IPR007122 GO:0051015
Lal7g1105 960 SMART VILL_6 256 345 IPR007122 GO:0051015
Lal7g1105 960 SMART VILL_6 520 607 IPR007122 GO:0051015
Lal7g1105 960 SMART VILL_6 393 490 IPR007122 GO:0051015
Lal7g1105 960 MobiDBLite consensus disorder prediction 741 786 - -
Lal7g1105 960 MobiDBLite consensus disorder prediction 754 775 - -
Lal7g1105 960 CDD gelsolin_S3_like 256 344 - -
Lal7g1105 960 Pfam Gelsolin repeat 638 679 IPR007123 -
Lal7g1105 960 Pfam Gelsolin repeat 157 210 IPR007123 -
Lal7g1105 960 Pfam Gelsolin repeat 42 125 IPR007123 -
Lal7g1105 960 Pfam Gelsolin repeat 272 338 IPR007123 -
Lal7g1105 960 SUPERFAMILY Actin depolymerizing proteins 225 349 - -
Lal7g1105 960 PANTHER VILLIN-4 15 960 - -
Lal7g1105 960 Gene3D Severin 521 613 IPR029006 -
Lal7g1105 960 SUPERFAMILY Actin depolymerizing proteins 596 717 - -
Lal7g1105 960 Gene3D Severin 146 248 IPR029006 -
Lal7g1105 960 CDD gelsolin_S5_like 519 609 - -
Lal7g1105 960 SUPERFAMILY Actin depolymerizing proteins 385 529 - -
Lal7g1105 960 Gene3D Severin 387 520 IPR029006 -
Lal7g1105 960 SUPERFAMILY VHP, Villin headpiece domain 885 960 IPR036886 GO:0003779|GO:0007010
Lal7g1105 960 MobiDBLite consensus disorder prediction 839 917 - -
Lal7g1105 960 Gene3D Villin headpiece domain 898 960 IPR036886 GO:0003779|GO:0007010
Lal7g1105 960 SUPERFAMILY Actin depolymerizing proteins 512 615 - -
Lal7g1105 960 CDD gelsolin_S4_like 388 483 - -
Lal7g1105 960 Pfam Villin headpiece domain 925 960 IPR003128 GO:0003779|GO:0007010
Lal7g1105 960 ProSiteProfiles Headpiece (HP) domain profile. 895 960 IPR003128 GO:0003779|GO:0007010
Lal7g1105 960 Gene3D Severin 614 733 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1105 Lal-Chr7 17026009 17033977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1105 - - gmx:100798962 1523.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1698 14 17151542 17161305 Lal7g1105 7 17026009 17033977 LSH
Lal7g1105 7 17026009 17033977 Lal4g1396 4 18190736 18194587 PCT