Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1000 ATGGTGTTGGCTTCCCCAAACCCGATCCACATAGAAAGGATTTTAGCCATTGACCTTCCCATAGTGGACCTTAAAGCAGAAAAATCAGTGGTGAAAAAGCTCATTGTGAAAGCTTGTGAAGAGTATGGTTTTTTCAAGGTTATAAACCATGGTATAACTCATGAAACTATAGCCAAAATGGAAGAATCATCATTTGATTTCTTTGCTAAACCAGTGACACAAAAGAAACAAGCTTCACCAGCTTATGGTTGCAAGAACATAGGCTTCAATGGAGACATTGGTGAGGTTGAGTACCTTATGCTTAATGCTACCACTCCCTCTATTACTCACTTATCCGATACCATATCCAATGACTTCAGGTGTAGTGTGAGTGCATACAGAGAAGCAGTGAAGAAGCTAGCATGTGAGATATTGGAGGTAATGGCAGAAGGGTTGGGGGTCCCTGATAGATCATTTTTCAGCAGATTGATCAACCATATTGATAGTGACTCAATCCTTAGGCTCAATCACTATCCTCCTATTATTAACAACAACAAAGATAGGGACAAGTCCTCTTCTTACAACTATACAAAGATTGGTTTTGGAGAGCATTCTGACCCTCAGATCTTGACTATACTAAGATCTAACGATGTGGGTGGCCTTCAAATCTCTCCTGAAGATGGTGTGTGGATCCCAGTAACACCAGATCCTTCAGCATTCTGTGTTAATGTGGGTGATGTATTACAGGTTATGACAAATGGAAGATTTGTAAGCGTGAGACATAGGGCAATGACGAACTCATACAAGTCTAGAATGTCAATGGTATATTTTGGGGCTCCACCACTCAATGCATGCATTGTTGCTCCACCAGTTTTGGTTACACCACAGAGGCCCTCTCTTTTCCGACCATTCACTTGGGCTGATTATAAAAAAGCTACCTACTCTCTCAAGCTTGGAGACACTCGCATTAACCTTTTCAGAACAATCCCTCATGCCCACTAA 981 0.4139 MVLASPNPIHIERILAIDLPIVDLKAEKSVVKKLIVKACEEYGFFKVINHGITHETIAKMEESSFDFFAKPVTQKKQASPAYGCKNIGFNGDIGEVEYLMLNATTPSITHLSDTISNDFRCSVSAYREAVKKLACEILEVMAEGLGVPDRSFFSRLINHIDSDSILRLNHYPPIINNNKDRDKSSSYNYTKIGFGEHSDPQILTILRSNDVGGLQISPEDGVWIPVTPDPSAFCVNVGDVLQVMTNGRFVSVRHRAMTNSYKSRMSMVYFGAPPLNACIVAPPVLVTPQRPSLFRPFTWADYKKATYSLKLGDTRINLFRTIPHAH 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1000 326 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 273 IPR005123 -
Lal7g1000 326 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 78 IPR026992 -
Lal7g1000 326 Pfam 2OG-Fe(II) oxygenase superfamily 163 271 IPR044861 -
Lal7g1000 326 SUPERFAMILY Clavaminate synthase-like 16 313 - -
Lal7g1000 326 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 321 - -
Lal7g1000 326 Gene3D - 6 311 IPR027443 -
Lal7g1000 326 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1000 Lal-Chr7 16201737 16206732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1000 22 320 Glycosyltransferase AT5G59530 27.726 2.45e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1000 K04125 - gmx:100783917 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1000 7 16201737 16206732 Lal7g1000 7 16201737 16206732 ECH
Lal14g1594 14 16450246 16455624 Lal7g1000 7 16201737 16206732 LSH
Lal7g1000 7 16201737 16206732 Lal3g0150 3 942698 948780 PCT
Lal3g0150 3 942698 948780 Lal7g1000 7 16201737 16206732 PCT