Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0977 ATGGAAAAAAGAGAAACATTTGTGCCCTTTGACATAGTGGAAGATGCATCAGATCACTATTTCATGAACCGAAACAATAATGGAGAAAGATGCTTGAGCAATTATAAGAGTAGTGGGGTCTACAAAGCCATAATGAAAGAGTGGAAAATCCTGGAACAAAACTTACCTGAATCCATCTATGTTAGGGTTTATGAATCACGTTTCGATTTGATGAGAGCAGTGATCGTGGGTGCTGAAGATACACCATACCATGATGGTCTCTTCTTCTTCGACATTGAATTTCCTTCTGATTATCCAAACGTTCCTCCAAAACTCTACTATCATTCATTAGGGTTTCGAATTAACCCTAATCTCTACAACAATGGCACCGTGTGTTTGAGTCTTCTCAACACATGGCACGGTAGCAGGAGTGAGAAATGGGACCCAACAGGTTCCACGATTCTGCAACTATTACTTTCCATTCAAGGACTCGTTCTCAACCAAAGACCATTCTTCAACGAACCAGGAAACAATTTATTCAGCATTGCTCTTCACAACAAGTCACGTGCCTATACCTGTGAAGTGTTTTCTCTCACGTGTCGCAGCTCCATCCATCTACTTCGGAATCCGCCGAAGCATTTCGAATCCTTTGTCGTCGAACATTTTCGCCGCCGAGGGCTCGCGGTTCTGATGGCATGCAATGAGTATGTGAATGGGAGAATTGTTGGGTATTTAAATGAGAATGGCTTGAAAGTTTCAAAGGAATTCAAGAATGATTTGAAAGCATTGTATCCTCTACTGCTTCAAGGGTTACGACGTTGCAATGCTTCTTTGGGAACTGTTGCTGAAACCTTGCAATTGGAGTCTGTGAATGGAGAAAAGAAGATCAGTGGAATCTTCAAAAGGGCTCTGGCAAAGATAAAAAAGGTTTTGGGGCTGAAGAATAGGGGACAAAAAAAGGTTAGTGGGATTGAAGGGTGA 960 0.4188 MEKRETFVPFDIVEDASDHYFMNRNNNGERCLSNYKSSGVYKAIMKEWKILEQNLPESIYVRVYESRFDLMRAVIVGAEDTPYHDGLFFFDIEFPSDYPNVPPKLYYHSLGFRINPNLYNNGTVCLSLLNTWHGSRSEKWDPTGSTILQLLLSIQGLVLNQRPFFNEPGNNLFSIALHNKSRAYTCEVFSLTCRSSIHLLRNPPKHFESFVVEHFRRRGLAVLMACNEYVNGRIVGYLNENGLKVSKEFKNDLKALYPLLLQGLRRCNASLGTVAETLQLESVNGEKKISGIFKRALAKIKKVLGLKNRGQKKVSGIEG 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0977 319 CDD UBCc 41 192 IPR000608 -
Lal7g0977 319 Gene3D Ubiquitin Conjugating Enzyme 1 269 IPR016135 -
Lal7g0977 319 SUPERFAMILY UBC-like 34 206 IPR016135 -
Lal7g0977 319 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38-RELATED 2 288 - -
Lal7g0977 319 Pfam Ubiquitin-conjugating enzyme 44 186 IPR000608 -
Lal7g0977 319 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 39 197 IPR000608 -
Lal7g0977 319 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 2 288 - -
Lal7g0977 319 SMART ubc_7 42 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0977 Lal-Chr7 16054133 16055092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0977 7 264 Miscellaneous Gene Families AT2G33770 50.190 2.99e-70 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0977 K10581 - gmx:100791343 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0977 7 16054133 16055092 Lal7g0977 7 16054133 16055092 ECH