LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal7g0909	ATGGCCACAGTTACGCAAAAAACGACGCCAATTCCTGATTGGAACATCGATCACACTCCAAAACCTGTTTCTATCACTCAACAACAATCTTCCATTAATGCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCAAGGAACCACTGCATTGACAAGGGCCCAGTCAAGCCACCCTTTGGACCCTTTATCTGCTGCCGAAATCACTGTGGCAGTGGCAACCGTGAGGGCAGCTGGTGCCACTCCAGAGCTCAGAGACAGTATGCGCTTTATTGAAGTAGTTTTATTGGAACCAGAGAAAAATGTTGTTGCACTTGCAGATGCTTATTTCTTTCCACCTTTCCAACCATCATTACTTCCTAGAACTAAAGGAGGGCCTGTAATTCCCAGTAAACTCCCTCCAAGATGCGCTCGGCTTGTTGTTTACAATAAGAGGACAAATGAGACTAGTATATGGGTTGTTGAATTATCAGAAGTACATGCAGTAACTCGAGGAGGTCATCACCGTGGAAAAGTAATTTCATCACATGTTGTTCTTGATGTTCAGCCTCCAATGGATGCTGTGGAATATGCAGAATGTGAAGCTGTTGTTAAAGATTTTCCTCCATTTAGAGAGGCTATGAAGAAAAGGGGTATTGAGGACATGGACCTTGTAATGGTTGATGCCTGGTGTGTAGGTAATTACAGTGAAGCTGATGCTCCCAGCCGTAGACTTGCTAAACCACTTATATTTTGTCGTGCTGAGAGTGACTGCCCTATGGAAAATGGCTATGCACGCCCTGTTGATGGCATCTATGTGCTTGTTGATATGCAAAACATGGTGGTGATTGAGTTTGAAGACCGCAAACTTGTTCCTCTCCCTCCAGTTGATCCCTTGAGGAACTATACTCCTGGTGGAACAAGAGGTGGAGTTGATAGAAGTGATGTAAAGCCCTTGCAAATTATTCAGCCTGAAGGTCCAAGCTTTCGTGTCAATGGACATTATATTGAATGGCAGAAGTGGAACTTTCGTATTGGATTCACACCCAGAGAAGGTCTGATTATATATTCTGTTGCATATGTTGATGGTAGTCGAGGGCGAAGGCCTGTAGCTCATCGACTGAGTTTTGTGGAGATGGTTGTGCCCTATGGTGACCCAAATGAACCACATTACAGGAAGAATGCTTTTGATGCTGGGGAAGATGGCTTGGGGAAAAATGCACATTCTCTCAAGAAGGGATGTGATTGTTTGGGCTACATCAAATATTTTGATGCCCACTTCATAAATTTCACCGGTGGAGTTGAGACAATTGAAAATTGTGTATGTTTGCATGAAGAGGATCATGGAATTCTGTGGAAGCATCAAGACTGGAGAACCGGCTTAGCAGAAGATGGGAGAATTGAAGCTGAAGTTAAGCTAACTGGAATTCTAAGCTTAGGAGCCTTGCTGCCCGGAGAGTATCGAAAATATGGAACCATGATTGCGCCAGGTCTATATGCTCCAGTTCATCAACACTTTTTTGTTGCTCGCATGGACATGGCTGTGGATTCTAAACCAGGTGACGCTTTGAACCAGGTTGTGGAGATCAATGTCAAAGTTGAGGAACCTGGGGAGAATAATGTCCACAATAATGCATTCTATGCTGAAGAGACTCTGCTAAGATCTGAATTGGAAGCAATGCGTGAATGCAATCCTTTGACTGCTCGACATTGGATTGTAAGGAACACGAGAACAGGAAATAGAACTGGACAATTGACAGGCTATAAGCTAGTACCTGGCTCAAACTGCTTGCCATTAGCAGGTTCTGAGGCCAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCATAATCTTTGGGTAACATCTTATTCACGTGATGAAATGTTTCCTGGAGGGGAATTTCCTAATCAAAATCCGCGTGTTGGTGAAGGACTAGCTACATGGGTTAAGCAGAACCGACCCTTGGAAGAAAGTGATATAGTTCTCTGGTATGTATTTGGAATTACCCATGTCCCTCGCTTAGAAGATTGGCCTGTTATGCCAGTAGAACGCATTGGTTTTATGCTCATGCCTCATGGATTCTTCAATTGCTCCCCTGCAGTAGATGTTCCACCTAGTCAATGTGAAATGGATTCTAAATATAATAATGGTGTGAAGGATAATAATGGGGGTCCCAAGCAAATTCAGCATGGATTAGTGGCAAAACTTTGA	2187	0.4376	MATVTQKTTPIPDWNIDHTPKPVSITQQQSSINALPPPPPPPPLPQGTTALTRAQSSHPLDPLSAAEITVAVATVRAAGATPELRDSMRFIEVVLLEPEKNVVALADAYFFPPFQPSLLPRTKGGPVIPSKLPPRCARLVVYNKRTNETSIWVVELSEVHAVTRGGHHRGKVISSHVVLDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDAWCVGNYSEADAPSRRLAKPLIFCRAESDCPMENGYARPVDGIYVLVDMQNMVVIEFEDRKLVPLPPVDPLRNYTPGGTRGGVDRSDVKPLQIIQPEGPSFRVNGHYIEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFINFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEDGRIEAEVKLTGILSLGALLPGEYRKYGTMIAPGLYAPVHQHFFVARMDMAVDSKPGDALNQVVEINVKVEEPGENNVHNNAFYAEETLLRSELEAMRECNPLTARHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNLWVTSYSRDEMFPGGEFPNQNPRVGEGLATWVKQNRPLEESDIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPSQCEMDSKYNNGVKDNNGGPKQIQHGLVAKL	728

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal7g0909	728	Gene3D	-	188	290	-	-
	Lal7g0909	728	SUPERFAMILY	Amine oxidase N-terminal region	182	298	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Lal7g0909	728	MobiDBLite	consensus disorder prediction	33	47	-	-
	Lal7g0909	728	Pfam	Copper amine oxidase, N3 domain	183	286	IPR015802	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Lal7g0909	728	Gene3D	-	45	185	-	-
	Lal7g0909	728	Gene3D	Copper amine oxidase, catalytic domain	454	697	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Lal7g0909	728	SUPERFAMILY	Amine oxidase N-terminal region	55	161	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Lal7g0909	728	PANTHER	AMINE OXIDASE	457	715	-	-
	Lal7g0909	728	PANTHER	AMINE OXIDASE	1	456	-	-
	Lal7g0909	728	Pfam	Copper amine oxidase, enzyme domain	312	453	IPR015798	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Lal7g0909	728	Pfam	Copper amine oxidase, enzyme domain	455	692	IPR015798	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Lal7g0909	728	PANTHER	COPPER AMINE OXIDASE	457	715	IPR000269	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Lal7g0909	728	PANTHER	COPPER AMINE OXIDASE	1	456	IPR000269	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Lal7g0909	728	SUPERFAMILY	Amine oxidase catalytic domain	306	697	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Lal7g0909	728	MobiDBLite	consensus disorder prediction	1	59	-	-
	Lal7g0909	728	Pfam	Copper amine oxidase, N2 domain	58	143	IPR015800	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Lal7g0909	728	Gene3D	Copper amine oxidase, catalytic domain	302	453	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal7g0909	Lal-Chr7	15571032	15577414	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal7g0909	K00276		-	gmx:100798722	1259.97

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal7g0909	7	15571032	15577414	Lal7g0909	7	15571032	15577414	ECH