Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0888 ATGGCGACTGAAGAAAGCAACGCTGTGGTTTCCGATTTCATCAGCTTCTTGAATGCTTCTCCAACTCCTTTCCACGCCGTTGAGGAGTCTAAAAAGCGGTTACGAAGCGCGGGTTTTGATCAGTTATCGGAGAGGGAAGCATGGAATTTGGAAGCTGGTAAAAAATATTTCTTCACAAGGAACCACTCTACCATTGTCGCCTTCGCTATTGGCAAACGATATGTTGCTGGGAATGGATTCTACATACTTGGTGCTCATACTGATAGTCCTTGTCTCAAACTGAAGCCAGTCAGCAAGGTGGTTAAAGGTGGATATTTGGAGGTAGGGGTTCAAACCTATGGTGGTGGATTGTGGCATACATGGTTTGATAGGGACTTGACTGTTGCTGGGAGGGTAATCATTCGAGAAGATAAAGGAGGTTCTGCTTCTTACTCCCATCGACTTGTTAGAATTGAGGAACCAATAATGAGGGTCCCAAATTTGGCAATTCACCTGGAAAGGAGTGTTAATGATGGATTCAAAGCCAACACTCAGACTCAACTTCTTCCCATTTTGGCAACAGCGGTGAAGGCGGAGCTCAATAAAGCAGTCTCTGAAAATGATTCATTTGAAAGTGGAAAGCAAAGGGATGGAAATAAATCAAATCATAAAACAGACACTATCAATACCAAGCACCACTTGCTTTTACTACAGTTGCTTGCAAGCGAGCTTGGGTGTGAACCAGATAACATTTGTGATTTTGAATTGCAAGCTTGCGATACCCAACCAAGCGTAGTTGCTGGAGCTGCGAAGGAGTTCATATTTTCAGGAAGACTTGATAACCTCTGCATGTCATTTTGCTCGTTGAAGGCATTGGTGGATGCTACATCCTCGGACAGCAGTCTCGAGGAAGAAATAGGTGTTAGAATGGTGGCCTTGTTTGACCATGAGGAATGTGGATCTAAGTCTGCCCAGGGAGCTGGCTCTCCTGTCATACTAAATGCTTTATCTAGGGTTACAAACTCCTTTAGCTCAGATTCCAAGATGCTTGACAAAGCAATACAAAATAGTTTCCTTGTGTCTGCTGATATGGCGCATGCACTACATCCCAATTACATGGACAAACATGAAGACAATCATCAGCCTAAACTACATGGAGGACTTGTCATTAAACATAATGCTAATCAGCGCTATGCAACTAACGCAGTCACGTCCTTCATATTCAGGGAGATAGCATCAAAACATAACCTTCCCATTCAGGATTTTGTGGTGCGCAATGACATGCCTTGTGGTTCAACGATCGGTCCCATCCTTGCAAGCGGTCTGGGTATTCGTACAGTTGATGTAGGTGCACCACAGTTGTCAATGCACAGCATACGTGAAATGTGTGCTACTGATGATGTGCAACACTCGTATGAGCATTTCAAGGCCTTTTTCCAAGAATTCTCTCATCTTGATGCAAAGCTTGTCGTGGACATTTAG 1461 0.4387 MATEESNAVVSDFISFLNASPTPFHAVEESKKRLRSAGFDQLSEREAWNLEAGKKYFFTRNHSTIVAFAIGKRYVAGNGFYILGAHTDSPCLKLKPVSKVVKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREDKGGSASYSHRLVRIEEPIMRVPNLAIHLERSVNDGFKANTQTQLLPILATAVKAELNKAVSENDSFESGKQRDGNKSNHKTDTINTKHHLLLLQLLASELGCEPDNICDFELQACDTQPSVVAGAAKEFIFSGRLDNLCMSFCSLKALVDATSSDSSLEEEIGVRMVALFDHEECGSKSAQGAGSPVILNALSRVTNSFSSDSKMLDKAIQNSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFIFREIASKHNLPIQDFVVRNDMPCGSTIGPILASGLGIRTVDVGAPQLSMHSIREMCATDDVQHSYEHFKAFFQEFSHLDAKLVVDI 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0888 486 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 80 96 IPR001948 GO:0004177|GO:0006508|GO:0008270
Lal7g0888 486 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 113 133 IPR001948 GO:0004177|GO:0006508|GO:0008270
Lal7g0888 486 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 152 169 IPR001948 GO:0004177|GO:0006508|GO:0008270
Lal7g0888 486 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 350 366 IPR001948 GO:0004177|GO:0006508|GO:0008270
Lal7g0888 486 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 439 454 IPR001948 GO:0004177|GO:0006508|GO:0008270
Lal7g0888 486 CDD M18_DAP 12 473 - -
Lal7g0888 486 SUPERFAMILY Zn-dependent exopeptidases 5 473 - -
Lal7g0888 486 PANTHER ASPARTYL AMINOPEPTIDASE 3 485 - -
Lal7g0888 486 SUPERFAMILY Aminopeptidase/glucanase lid domain 92 250 - -
Lal7g0888 486 Pfam Aminopeptidase I zinc metalloprotease (M18) 16 472 IPR001948 GO:0004177|GO:0006508|GO:0008270
Lal7g0888 486 Gene3D Zn peptidases 12 471 - -
Lal7g0888 486 PANTHER ASPARTYL AMINOPEPTIDASE 3 485 IPR001948 GO:0004177|GO:0006508|GO:0008270
Lal7g0888 486 Gene3D Aminopeptidase i, Domain 2 90 255 IPR023358 GO:0004177
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0888 Lal-Chr7 15383785 15389341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0888 K01267 - qsu:112022838 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0888 7 15383785 15389341 Lal7g0888 7 15383785 15389341 ECH