Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0884 ATGGCTCAGTTGAAGACATTTCCTTCTTATTCTTACCCTGCAACTTCTCCTTCCCGACACAGAACAGTTATAAGAGCAGTGGTACACAATGATACAGACACAGAAATTTCTGAATCGAAGAAGGTTAGCGGGCTACGTGGAAAATTAAATAAGGTTGTCCTGGCTTACAGTGGTGGCTTAGACACATCAGTCATTGTCCCATGGCTGAGAGAGAATTATGGCTGTGATGTTGTTTGCTTCACAGCTGATGTTGGCCAAGGGATAAAAGAACTGGATGGCTTAGAAGCCAAAGCCAAAGCTAGTGGGGCCTCTCAGTTAGTGGTAAAGGACTTGAGGGAGGAATTTGTTAGCGATTATATATTCCCTTGCCTGCGTGCTGGTGCAGTTTATGAGAGGAAGTATTTGCTTGGCACTTCAATGGCTCGCCCCGTTATTGCAAAGGTTCGATTTGAGCTCACTTTCTTTGCTCTAAACCCCAAGCTAAACGTTGTGGCTCCATGGAGAGAGTGGGATATTACTGGGAGAGAAGATGCTATTGAGTATGCTAAAAAGCATAATGTACCGGTTCCTGTAACAAAGAAATCCATATATAGCAGAGATAGGAACCTCTGGCACCTTAGTCACGAGGGTGATATTTTGGAAGACCCAGCTAATGAGCCTAAAAAGGATATGTACATGATGTCTATAGACCCAGAGGATGCTCCAAATCAAGCACAATATGTGGAAATTGGGATAGAATCAGGGCTTCCTGTTTCAGTTGATGGGAAGAGACTTTCGCCAGCATCTTTACTTGCCGAACTCAATGAAATTGGTGGAAGGCATGGAATTGGCCGAATTGACATGGTTGAGAATAGGCTTGTAGGTATGAAGAGCCGTGGAGTTTATGAAACTCCTGGTGGGACCATCCTATTTAGTGCAGTCCGCGAGTTGGAATCTTTGACACTTGATCGAGAAACGATTCAAGTCAAAGATTCATTAGCCCTCAAGTATGCGGAGTTGGTGTATGCTGGGAGATGGTTTGATCCACTTCGTGAATCCATGGATGCATTTATGCAGAAGATTATGGAGACCACAACTGGTTCTGTGACTTTGAAGTTGTACAAAGGATCTGTTACTGTAACCGGACGGAGGAGCCCCTTTAGCCTGTATAGGCAAGACATTTCATCATTTGAAAATGGGCAGATATATGATCAAGCTGATGCTGCTGGGTTTATCCGGCTTTATGGTCTTCCGATGAGGGTCCGAGCAATGCTTGAGCAGGGTATCTAA 1269 0.4437 MAQLKTFPSYSYPATSPSRHRTVIRAVVHNDTDTEISESKKVSGLRGKLNKVVLAYSGGLDTSVIVPWLRENYGCDVVCFTADVGQGIKELDGLEAKAKASGASQLVVKDLREEFVSDYIFPCLRAGAVYERKYLLGTSMARPVIAKVRFELTFFALNPKLNVVAPWREWDITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPKKDMYMMSIDPEDAPNQAQYVEIGIESGLPVSVDGKRLSPASLLAELNEIGGRHGIGRIDMVENRLVGMKSRGVYETPGGTILFSAVRELESLTLDRETIQVKDSLALKYAELVYAGRWFDPLRESMDAFMQKIMETTTGSVTLKLYKGSVTVTGRRSPFSLYRQDISSFENGQIYDQADAAGFIRLYGLPMRVRAMLEQGI 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0884 422 TIGRFAM argG: argininosuccinate synthase 147 415 IPR001518 GO:0004055|GO:0005524|GO:0006526
Lal7g0884 422 CDD Argininosuccinate_Synthase 52 411 IPR023434 GO:0004055
Lal7g0884 422 Pfam Arginosuccinate synthase 148 414 IPR001518 GO:0004055|GO:0005524|GO:0006526
Lal7g0884 422 Pfam Arginosuccinate synthase 53 147 IPR001518 GO:0004055|GO:0005524|GO:0006526
Lal7g0884 422 ProSitePatterns Argininosuccinate synthase signature 1. 55 63 IPR018223 GO:0004055|GO:0005524|GO:0006526
Lal7g0884 422 Hamap Argininosuccinate synthase [argG]. 49 420 IPR023434 GO:0004055
Lal7g0884 422 SUPERFAMILY Argininosuccinate synthetase, C-terminal domain 194 420 IPR024074 GO:0004055
Lal7g0884 422 Gene3D HUPs 148 197 IPR014729 -
Lal7g0884 422 PANTHER ARGININOSUCCINATE SYNTHASE 147 420 IPR001518 GO:0004055|GO:0005524|GO:0006526
Lal7g0884 422 PANTHER ARGININOSUCCINATE SYNTHASE 48 147 IPR001518 GO:0004055|GO:0005524|GO:0006526
Lal7g0884 422 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 50 227 - -
Lal7g0884 422 Gene3D Argininosuccinate synthetase, chain A, domain 2 198 421 IPR024074 GO:0004055
Lal7g0884 422 Gene3D HUPs 50 147 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0884 Lal-Chr7 15365783 15369703 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0884 K01940 - gmx:100816038 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0884 7 15365783 15369703 Lal7g0884 7 15365783 15369703 ECH