Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0876 ATGAACTGTCGAGAGGCCACTGTAGCTGCCACTGCTACATTATTCGGTGCGTTGGCCTCCGCAGTCGCACTCCGTTTCTTTTACCGCTCCCATTCATCCAAATCAATTCCCTCTCAAAACCACATACACTCTAATAACCGCTCTTCAATCGACCCTTTTGATCCCTCTAAGCGCAACGGATACTTATCGTGGGATGATTATTTCATGGCAATTGCATTTTTGTCAGCTGAAAGATCCAAAGATCCTAACAGACAGGTTGGGGCGTGTTTGGTGAGCCAAGATGGTATCATACTTGGTATTGGTTATAATGGATTTCCAAGAGGTTGTGCTGATGACAAGCTACCCTGGGCAAAGAAATCCAGGACTGGGGATCCTCTGGAGACAAAGTACCCATATGTTTGTCATGCAGAAGTAAATGCTATTCTTAACACAAATCATGCCTCTGCTGCTGGACAACGGCTATATGTGACCATGTTTCCTTGCAATGAATGTGCTAAGATCATAATCCAGAGGCATTTTCTTCGTTCAAAGACGCGGAAGCAAATCATAATACAAGTCTTTGCAAGTGAAGAGCCTCAGTCAGGAGTTTCTGAAGTTATTTATTTTGTAGAGAAGAGGTTAGAAAATTCAGATATTGCATACATAGCCTCTCATAAGCTACTTTCATTGGCTGGTGTAAAGGTGAGGAAACACCAACCACTGATGAATGAAATTCGCTTGAAATTTGAAGAGCGCTAG 738 0.4295 MNCREATVAATATLFGALASAVALRFFYRSHSSKSIPSQNHIHSNNRSSIDPFDPSKRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCADDKLPWAKKSRTGDPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQRHFLRSKTRKQIIIQVFASEEPQSGVSEVIYFVEKRLENSDIAYIASHKLLSLAGVKVRKHQPLMNEIRLKFEER 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0876 245 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 193 244 - -
Lal7g0876 245 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 171 - -
Lal7g0876 245 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 63 198 IPR002125 -
Lal7g0876 245 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 135 168 IPR016192 GO:0008270|GO:0016787
Lal7g0876 245 SUPERFAMILY Cytidine deaminase-like 65 232 IPR016193 GO:0003824
Lal7g0876 245 CDD deoxycytidylate_deaminase 65 201 IPR035105 -
Lal7g0876 245 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 193 244 IPR015517 -
Lal7g0876 245 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 1 171 IPR015517 -
Lal7g0876 245 Gene3D Cytidine Deaminase, domain 2 55 175 - -
Lal7g0876 245 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 63 171 IPR002125 -
Lal7g0876 245 Coils Coil 240 245 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0876 K01493 - gmx:100792003 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0876 7 15310872 15314681 Lal7g0876 7 15310872 15314681 ECH