Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0870 ATGTCGATACGCCGCCTTAGGCTAGAAGACTACGAAGACGACGAAGAAGGAGAAGAAGCAATTCAAATACTCTCTTCCCAATCACACACTACTCCACCGCATCAATTTCCAATTTCAAACCCTACCAATCTTCCCTCTGAGTCTCTTCAAATTTCCTCCGACGAAGACTTCGTTGACGTCCCCGATAACCTCTCACCGCCGTCTCCTCAGCCCTCTTCCGACTGTCCTATTGCCGATTCTCTCCGCCGCCTTGGATTGGGACTGAAGAGAGAGTGGCTCAGTGATTGTCTTCGCGAATTGGATTGTGCCCTAAGAGGTTTCTCAGGGTTCGATGTTACTACTAAGGCCAAGCTCTGTTTCGAACAGTTCCTTTTTGCTGATATGAATTTCTGTGGGAGTGGCATTCTTCCTCCCACTGTGGATTCCATGCATCTTGCTCTGCTTCCCGGTCCCTATGTATTGCAGGTTGATGAAATAGTTAATATCACTTGTCCTCTCAGAGGCAGATATAATCAAGCCCCTCCTGGAGCTAAAAGGTGCCTAAAGTTGTCAATGACTGATGGAATTCAGAGAGTCTTTGGAATGGAGTACAGGCCCATTCAAGCTCTTGAAGGGTGTGCACCTGCTGGTCTAAAGGTTGTTATCTCTAATGTACATGTACGTCATGGACTTTTGATGCTGGTCCCTGAAACCATTGAAATTTTGGGGGGATTGGTTGAGCAGCTGGATGCAGCTCGAAAGCGACTAGTTGATGAATTAAATAAGCCACCCAGAGGAAAAAGAACTAAAAATGGAGCGCTTCCTCCTCTAGCAAGTAGAGCAAATCTTGCTGCATGGCCATCAAGTGGGGTTGATGACCTTAGGCACAGTAGCTCTACGTTACGAAGTAATGATTCTGTCCAAGTAAACCACCAAGGCACGCCCTTAATCTTACAAATAAAAATACATGTATGCCTGTTTGGATGGAGGTGTATACCTATTGTAAAACCTGTATCCATCTTAGTTTTCTTGATTTTTGTTCTCATCTGTTCTCCTTGCCATCATTTAATGACAGGTGCTCACGTGAACACTCATGGCTCTGGTACTCGTGCTGCACAGTCATCAAGTGGAGTTCATCTTAGGCACGAGAGCTCTACGTTACACAGTAATGATAATGTCCATGCAAGCAATCAAGGTGCTGGTCTGAGAACTAATGGCACCAGTAATAGCTTACCTCGTGCTGCATGGCCATCAGTTGAAGTTGATGATCTTAGGCACAGTAGCTCTACGTTTCGAAGTAATGATTCATTCCAGGCAAGCAATCAAGGTGCTGGCATTGGCACAAATGGCAATGGTCACAGTTTAACAACAGAAGATACTTCGCATATGGGTTTACAAAATGATGTTGCCAATTCAATACCCCGGATGGCTTCCGATGCGGAGCCCATGAATATGGATATGCATGAGGATACGAATCATGTGTCCGTTGCTAATTCTATGGTTAACCAGTTCTCCTCTATTGTTGCAAAGGCTGAGGAGATGCATATAGATGCCACTAACATAACCAGGGGAAATTCTGTTAGCAACCAATCTTCTCATATGCGCTCAAATATTGCAGTGGCGCCTGAAGACACTGTTCATATAACGAGAGAAAGAAGATATTCCTCCACTGTTTCAAGCTCTGATGATTTTCATATGTTTGATGCCAGTGATGACCCACTCATATTCTGTGGAGACGAAGAAGTTCCTTTTACATACTTAGCTAGTTTGTCAGCCAAGTGGGCTGCAACGAAGGAGAAGGCTCCTTCTGTTCAGGGTAAAATTAAGTGCTTTTTGACTGGTGTGAAGGGATTCCAGTATAAGAAAAGGACAACATATGAGCTTCAGGCATATGTAGACGATGGTAGCCTTATTTCAGAAATCCTTATTGATCATGATGTTGTTCAGCAAGGAATTGGTTATTCTCCTCAGGAGGTCACTGCAGCTCTTTCTTCTCCTGACACCAAAATAGTCCACAACATGAAGGAGACAATGCGTAGATTCCAAGGATTTTTAGCAAACTTTGAGGGAGTAATGCTTGTGGAATTAAATAGAAAATCTTCCCTCCCTCTTGCCCTAGAGATGAGTCAAGGCTGTCCTCAATCTGATGCATGGTTACTTCTGAGAAGGCTAAAGTCTCCTCAACCTGCGCAAGTTCAGAGACATATCCTTTCGGATCCTATAGAATTATCCCCTTAA 2217 0.4416 MSIRRLRLEDYEDDEEGEEAIQILSSQSHTTPPHQFPISNPTNLPSESLQISSDEDFVDVPDNLSPPSPQPSSDCPIADSLRRLGLGLKREWLSDCLRELDCALRGFSGFDVTTKAKLCFEQFLFADMNFCGSGILPPTVDSMHLALLPGPYVLQVDEIVNITCPLRGRYNQAPPGAKRCLKLSMTDGIQRVFGMEYRPIQALEGCAPAGLKVVISNVHVRHGLLMLVPETIEILGGLVEQLDAARKRLVDELNKPPRGKRTKNGALPPLASRANLAAWPSSGVDDLRHSSSTLRSNDSVQVNHQGTPLILQIKIHVCLFGWRCIPIVKPVSILVFLIFVLICSPCHHLMTGAHVNTHGSGTRAAQSSSGVHLRHESSTLHSNDNVHASNQGAGLRTNGTSNSLPRAAWPSVEVDDLRHSSSTFRSNDSFQASNQGAGIGTNGNGHSLTTEDTSHMGLQNDVANSIPRMASDAEPMNMDMHEDTNHVSVANSMVNQFSSIVAKAEEMHIDATNITRGNSVSNQSSHMRSNIAVAPEDTVHITRERRYSSTVSSSDDFHMFDASDDPLIFCGDEEVPFTYLASLSAKWAATKEKAPSVQGKIKCFLTGVKGFQYKKRTTYELQAYVDDGSLISEILIDHDVVQQGIGYSPQEVTAALSSPDTKIVHNMKETMRRFQGFLANFEGVMLVELNRKSSLPLALEMSQGCPQSDAWLLLRRLKSPQPAQVQRHILSDPIELSP 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0870 738 SMART DUF1767_2 78 171 IPR033472 -
Lal7g0870 738 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 576 717 IPR032199 GO:0000166
Lal7g0870 738 Gene3D - 127 253 IPR042470 -
Lal7g0870 738 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 72 722 - -
Lal7g0870 738 MobiDBLite consensus disorder prediction 423 448 - -
Lal7g0870 738 MobiDBLite consensus disorder prediction 26 48 - -
Lal7g0870 738 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 72 722 - -
Lal7g0870 738 MobiDBLite consensus disorder prediction 57 76 - -
Lal7g0870 738 MobiDBLite consensus disorder prediction 358 407 - -
Lal7g0870 738 Pfam RecQ mediated genome instability protein 85 248 IPR013894 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0870 K10990 - gmx:100803734 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0870 7 15249082 15255463 Lal7g0870 7 15249082 15255463 ECH