Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0851 ATGGGTAACTGCTGCTCCGACGTCCCCGGAGCCCGTACGGCCATCGGCGCCACCTCCGCCGATCTCCGTAATCAGGGAGACGCTGGCAACGACGCTGTCGATAACTTCCTCAGGTCTCGCGGCTACCACGGCCTCTATTCTCAGATTGAGTTGTCGTTTTCTGCTTCTGGCTTGCGTGATCGCGATGTGCTTTCCAAGAGTGATCCAATTATGGTTCTTTATGCAAGAGGGAAAAATGGCGTGCTTGAAGAACTTGGACGCACAGAAGTAGTTCTTAATTCACTGAATCCTGCATGGATTACGAAGCATACTATCATTTACCATTTCGAGATTGTTCAGGTTTTAGTGTTTCGTGTGTATGATGTTGATACTCAGTTTCACAATGCACATGTGAAGATGCTTAAGCTAGAAGAGCAACAATTTCTAGGTGAGGCAACCTGTGCATTATCCGAGATAATTACAAAGGTTGATCGATCATTGACATTAGATCTACATGGAGGAGATTCTATGAGACCTCCCAACTCCCAAAACTGGGGGAAGCTCTCAGTGCATGCTGAGGAATGTGTTACCTCAAAAACTACAATAGAGATGATATTCAGGTGTTCAGATTTGGAATATAGGGTTCTCTTCTCCAGAAGTGATCCCTTTTTATTGATATCAAAAGTTGTGGAAGGTGGTGCCCATATCCCAATTTGCAAAACAGAAGTTATAAAGAATGATCTCAACCCTGCATGGAAGCCAGTGTTCTTGAATATCCAACAAGTAGGAAGCAAGGAAAGTCCCTTGGTAGTGGAATGCTATAACTTCAATAGCAATGGGAAACATGATTTGATGGGAAAAGTGCAGAAATCTTTAGTGGACTTGGAGAAGGTTCATTCTGGTGGCCAAGGAGAAAATTTATTTTTGTCCACTGCTGTGGGTCATAATTCTCATAACAAGGTGTTAAAGAGCCGGCTATTTGTGGACAAATTTTCTGAAAGTATCCAATATACTTTCCTGGATTACTTGTCTGGGGGATTTGAATTGAACTTCATGGTGGCCATTGATTTTACAGCTTCAAATGGAAATCCACGCCTTCCAGATTCTTTGCATTATATTGATCATTCAGGACGGCCAAATGCATACCAGAGGGCGATTGTTGAGGTTGGGGAGGTGATACAGTTTTATGATTCGGACAAACGATATCCTACATGGGGATTTGGAGCACGACCAATTGATGGTCCTGTATCCCATTGTTTCAATTTGAATGGAAGCAGTCATTACTGTGAGGTGGAAGGGATTCAAGGAATTATGATGGCATACACAAGTGCCTTACTTAACGTTTCTCTTGCAGGACCAACTCTTTTTGGACCTGTCATAAGCAATGCTGCACTGGTTGCTAGCCAATCTGTAGCAGCTGGTGGAAGAAAGTACTTTGTTTTGTTAATAATTACAGATGGAGTAGTGACAGATCTGCAAGAAACAAGAGATGCTATCGTTAAAGCATCTGACCTACCATTATCAATCCTTATTGTTGGTGTAGGAGGAGCTGATTTCAAAGAAATGGAGGTGTTGGATGGAGACGGGGGAGAAAAGCTAGAAAGTTCAACTGGGCGTGTTGCTTCGCGTGATATAGTCCAATTTGTTCCATTCCGGGATGTTCAAAGTGGAGAAATTTCAGTAGTTCAAGCACTTCTAGCAGAATTACCTACTCAATTTTTAACTTACATGCGGAGCAGAAATATCCAACCAAGCCTCTAG 1740 0.4282 MGNCCSDVPGARTAIGATSADLRNQGDAGNDAVDNFLRSRGYHGLYSQIELSFSASGLRDRDVLSKSDPIMVLYARGKNGVLEELGRTEVVLNSLNPAWITKHTIIYHFEIVQVLVFRVYDVDTQFHNAHVKMLKLEEQQFLGEATCALSEIITKVDRSLTLDLHGGDSMRPPNSQNWGKLSVHAEECVTSKTTIEMIFRCSDLEYRVLFSRSDPFLLISKVVEGGAHIPICKTEVIKNDLNPAWKPVFLNIQQVGSKESPLVVECYNFNSNGKHDLMGKVQKSLVDLEKVHSGGQGENLFLSTAVGHNSHNKVLKSRLFVDKFSESIQYTFLDYLSGGFELNFMVAIDFTASNGNPRLPDSLHYIDHSGRPNAYQRAIVEVGEVIQFYDSDKRYPTWGFGARPIDGPVSHCFNLNGSSHYCEVEGIQGIMMAYTSALLNVSLAGPTLFGPVISNAALVASQSVAAGGRKYFVLLIITDGVVTDLQETRDAIVKASDLPLSILIVGVGGADFKEMEVLDGDGGEKLESSTGRVASRDIVQFVPFRDVQSGEISVVQALLAELPTQFLTYMRSRNIQPSL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0851 579 ProSiteProfiles C2 domain profile. 27 162 IPR000008 -
Lal7g0851 579 Pfam Copine 362 577 IPR010734 -
Lal7g0851 579 Pfam C2 domain 54 154 IPR000008 -
Lal7g0851 579 Pfam C2 domain 198 289 IPR000008 -
Lal7g0851 579 CDD vWA_copine_like 312 566 IPR010734 -
Lal7g0851 579 PANTHER CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING COPINE FAMILY PROTEIN-RELATED 1 578 - -
Lal7g0851 579 SMART VWA_4 341 538 IPR002035 -
Lal7g0851 579 ProSiteProfiles C2 domain profile. 177 301 IPR000008 -
Lal7g0851 579 SUPERFAMILY vWA-like 341 525 IPR036465 -
Lal7g0851 579 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 168 IPR035892 -
Lal7g0851 579 CDD C2A_Copine 47 169 - -
Lal7g0851 579 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 197 290 IPR035892 -
Lal7g0851 579 Gene3D C2 domain 52 197 IPR035892 -
Lal7g0851 579 PANTHER COPINE 1 578 IPR045052 GO:0005544
Lal7g0851 579 SMART C2_3c 193 300 IPR000008 -
Lal7g0851 579 SMART C2_3c 48 161 IPR000008 -
Lal7g0851 579 CDD C2B_Copine 195 290 IPR037768 -
Lal7g0851 579 Gene3D C2 domain 198 320 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0851 Lal-Chr7 15069358 15079448 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0851 - - gmx:100807801 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0851 7 15069358 15079448 Lal7g0851 7 15069358 15079448 ECH
Lal14g1421 14 15449899 15457075 Lal7g0851 7 15069358 15079448 LSH