Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0171 ATGCATAGATCTGGAGCTACAATGGCATGGAACGTGTTCAAATTTTGCACTGCTCTTCGAGGGTTAGGCTCAATCATGATTCTATTGGTTCTTGGGGTTGTTGGTGTTACTTACTACGCTGTCGTTTTGACTAATTATGGTCCTGCTTTGTATGCTGGAGGACTTGATTTTCTGTCTGCTTTTGCTGTTTTGATTTTGTTTCATAGTTTGTTGGTTATGCTATTGTGGAGTTACTTTTCTGTTGTTTTTACCGATGCGGGGAGTGTACCTCCAAACTGGAAGCCTGCCGTTGATGAGGAGAGAGGAGAGGTTGACCCATTAGTTGGGTCAGATTTCAATAATGTTGCGCCTTCTGATCCTTCCAATCAACATATCCGTTTCTGTCGAAAGTGCAATCAACTCAAGCCGCCCCGATGCCACCATTGTTCAGTTTGTGGCCGCTGCGTCCTGAAGATGGACCACCATTGCGTCTGGGTAGTTAACTGTGTTGGGGCACTGAATTACAAGTATTTCCTTCTTTTCTTGTTCTACACTTTTCTTGAGACGACTCTTGTGACTGCATGTTTGTTGCCACAATTCTTAGCATTCTTTAGTGATGGAGAAATTCCCGTGACACCTGGCTCTCTTGCTACAACTTTTCTTGCTTTTGTTTTGAATCTGGCCTTCGCATTGAGTGTCATGGGATTTCTCATTATGCACATATCTTTGGTGGCTGCTAATACGACAACTATTGAGGCATATGAAAAGAAAACTTCACCAAAATGGCGTTATGATCTTGGTCGTAGAAAAAATTTCGAACAGGTATTTGGAATGGACAAGAGATATTGGTTTATCCCTTGTTATTCAGAAGAAGATATAAGAAAGATGCCAGCACTACAAGGTCTTGAATATCCATCAAAACCAGACTTTGATTCCCAATAG 921 0.418 MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVLTNYGPALYAGGLDFLSAFAVLILFHSLLVMLLWSYFSVVFTDAGSVPPNWKPAVDEERGEVDPLVGSDFNNVAPSDPSNQHIRFCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETTLVTACLLPQFLAFFSDGEIPVTPGSLATTFLAFVLNLAFALSVMGFLIMHISLVAANTTTIEAYEKKTSPKWRYDLGRRKNFEQVFGMDKRYWFIPCYSEEDIRKMPALQGLEYPSKPDFDSQ 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0171 306 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 14 300 - -
Lal7g0171 306 Pfam DHHC palmitoyltransferase 122 249 IPR001594 GO:0016409
Lal7g0171 306 ProSiteProfiles DHHC domain profile. 126 176 - -
Lal7g0171 306 PANTHER S-ACYLTRANSFERASE 14 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0171 Lal-Chr7 2108621 2114580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0171 8 306 Lipid Metabolism Gene Families AT4G22750 65.894 4.62e-130 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0171 K20028 - gmx:100819811 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0880 14 11184928 11190239 Lal7g0171 7 2108621 2114580 LSH
Lal7g0171 7 2108621 2114580 Lal19g0244 19 2373766 2378064 LSH