Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0049 ATGGCTTCTTTCGTTTTCTTAGTGTTTGTTCTCACTAGCCATTTCATTGCTGGGTTTAGTACACAGTTACCACCTCCTAACTATGGAAACACAATAACCATTCTAAGCATTGATGGAGGTGGTATTAGAGGGATTGTTCCAGCAGTGATTCTTCAACACTTGGAGAAGTCACTTCAGGTGTTTGATAAAGATGCAAGTTTAGCAGAATATTTTGATGTGATAGCTGGAACTAGCACAGGAGGACTTATGACATCTTTGTTAACTACACCAGAACCACATACAAATGTTCCTTTGTTTACTGCTTCTAAACTTATACAGTTTTATAAGGAACTTGGTCCTCAGATTTTCAATAAAACTAGTGGTTGGAATGCTACATATCCGGGTCCTAAGTATGATGGGAAGTTCTTACACAATATAGCACGTGAAATATTGAAAGATGCAAGGCTTAAGGATACTTTGACCAATGTTGTAATTCCAACCTTTGACTTGAAGAGGCTTCATCCAGTTATTTTCTCCAAATTTAAGGTGAAGAAAGTTCCTAGCTTAAATGCAAAACTGTCAGATATAAGCATAGGAACTTCAGCTGCACCAACTTATCTACCACCCTATTACTTCAAGAATGGTAACACTGACTTTAATTTGGTTGATGGTGGTGTAGCTGCAACTAATCCGGCTATGGCTGCAGTGAGTGAAGTGATACAACAACTGAAAGAGAAGAATCCTAGGTTTAAGAGACACAACAAAATTTTGTTGTTGTCAATAGGATGTGGAACAAAAAAAGCTGTAGGGTATGATGCTAATGTTGCAGGACAATGGTCACAAGGTTTTTGGGTACAATCAGGGCTTTCAGGTGCTATTTATGATTATGCTGCTAAAGATATGACTGACTCTAACCTTGCTACTGTCTTCCCTGGCCTACAATCTCCAAACAACTACCTTAGAATTCAGGATTATAATTTGGATCCATCAATGGATTCCCTTGACAATGCTACACAAGTAAACATGGAAAATCTTGAAAGTGTAGGAAAGAAGTTGCTGAATGAAACAGTTTTAAGGATGAATGTAGCCACTTTTGTCCCTGAAAAGGACAAAAATGCTGTTACAAATGCTAAGGCACTTGAGAGATTGGCAAAGATTCTGCATAAAGAGAAAACGCTGCGTTTGGAAAATATATTGATGGAAAAAAGTGGAAGACCATTTATTGAAAATGATGCAATTCCTTTGGGAAGAAGCTGGACAAGTTAG 1245 0.3783 MASFVFLVFVLTSHFIAGFSTQLPPPNYGNTITILSIDGGGIRGIVPAVILQHLEKSLQVFDKDASLAEYFDVIAGTSTGGLMTSLLTTPEPHTNVPLFTASKLIQFYKELGPQIFNKTSGWNATYPGPKYDGKFLHNIAREILKDARLKDTLTNVVIPTFDLKRLHPVIFSKFKVKKVPSLNAKLSDISIGTSAAPTYLPPYYFKNGNTDFNLVDGGVAATNPAMAAVSEVIQQLKEKNPRFKRHNKILLLSIGCGTKKAVGYDANVAGQWSQGFWVQSGLSGAIYDYAAKDMTDSNLATVFPGLQSPNNYLRIQDYNLDPSMDSLDNATQVNMENLESVGKKLLNETVLRMNVATFVPEKDKNAVTNAKALERLAKILHKEKTLRLENILMEKSGRPFIENDAIPLGRSWTS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0049 414 PANTHER PATATIN 2 395 - -
Lal7g0049 414 PANTHER XYLOSE ISOMERASE 2 395 - -
Lal7g0049 414 SUPERFAMILY FabD/lysophospholipase-like 31 358 IPR016035 -
Lal7g0049 414 Pfam Patatin-like phospholipase 35 228 IPR002641 GO:0006629
Lal7g0049 414 Gene3D Cytosolic phospholipase A2 catalytic domain 25 392 - -
Lal7g0049 414 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 229 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0049 Lal-Chr7 435713 446411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0049 23 387 Miscellaneous Gene Families AT2G26560 46.253 2.15e-98 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0049 - - gmx:100802114 532.717