Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0027 ATGGCTCAAGCAATGGCATCAATGACTAGTTTATCACATGCTCTTTTGGAAGGTAATAATAGGGTGAGTTCAGTTACACGTTTCGTAGTTAGAGCTCAGAATGTTGAACCACTAAGTAGCAGAAGAAGTGTTATTGGTCTTGTTGCTACTGGTTTGGTAACTGGATCTTTTGTTCAAACTGTTCTTGCTGATGCTATTCCTATCAAAGTTGGTCCTCCTCCTCCACTTTCTGGTGGACTTCCTGGAACATTGAACTCAGATGAAGCAAGAGACCTTGATCTGCCATTGAAACAAAGGTTCTTCATTCAACCATTGACTCCAAATGAGGCAGCACAAAGGACAAAGGAATCAGCTAAGGAAATTGTTGCTGTCAAGAAGTTCATAGAGAAGAAGGCTTGGCCTTCTGTTCAGAATGATCTGCGTTTGAGGGCCGAGTATCTTCGCTATGACCTTAACACTATCATCGCTTCCAAGCCGAAAGAAGAGAAGCAATCCCTCAAGGAACTTGCTGGAAAACTTTTCCAAGATATCAACAATTTGGATTATGCAGCAAAAGTTAAGAGCTCCCCAGAAGCAGAGAAGTACTATGCTGAGACTGTATCTACTTTGAATGATGTTCTTGTTAAATTTGGTTAA 636 0.4104 MAQAMASMTSLSHALLEGNNRVSSVTRFVVRAQNVEPLSSRRSVIGLVATGLVTGSFVQTVLADAIPIKVGPPPPLSGGLPGTLNSDEARDLDLPLKQRFFIQPLTPNEAAQRTKESAKEIVAVKKFIEKKAWPSVQNDLRLRAEYLRYDLNTIIASKPKEEKQSLKELAGKLFQDINNLDYAAKVKSSPEAEKYYAETVSTLNDVLVKFG 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0027 211 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 4 210 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lal7g0027 211 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 4 210 - -
Lal7g0027 211 Gene3D - 64 211 IPR023222 -
Lal7g0027 211 SUPERFAMILY Oxygen-evolving enhancer protein 3, 100 207 IPR023222 -
Lal7g0027 211 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 23 210 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0027 Lal-Chr7 214820 216782 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0027 K08901 - gmx:100499794 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0092 14 997195 998684 Lal7g0027 7 214820 216782 LSH