Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0015 ATGATGCAAAAGAGAGTGAATCGGAGTATGTGGTTGTTAAGATCGGTACTACACAGTAACAGCAGAACCCTTTCTTCTTCTTCTTCTGATGTTGATGTTCTGAATAATGTTCTCAATAACCAGGTATTGGTAGAAGGAAATGGATATACAAGAATGGCTATTCTCAATAGACCCTCTGCTCTCAATGCTATCAACACCAATATGGTATTCTACTATTCTATTTACTATTATGCCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGGCAACTAGGCTGCATAAACTTTACAGAACTTGGGAAGAAGATCCTCACATTGCCTTCCTCATCATTAAGGGCAGTGGCCGGGCATTTGCAGCTGGAGGAGACATTGTTGCACTTTATCATCTCATAAACCAAGGGAAAATGGAAGTGTGTAAAGAATTTTTTAGAACAATATACACTTTTATATATCTCATAGGTACATATATGAAGCCACATGTTGCTCTTCTGAATGGCATTACCATGGGTGGTGGGGCAGGAGTTTCAATCCCTGGGACATTCCGGGTTGCAACAGACAAAACTATTTTTGCGACACCTGAAGTTCTTATTGGATTCCACCCTGATGCTGGAGCATCTTTTTATCTTTCACACCTGCCTGGTCACTTAGGTGAGTACTTGGCTCTAACAGGGGAAAAACTCAATGGGGTAGAGATGGTTACCTGTGGGCTTGCTACACACTATTCACTAAGTGCACGGCTCCCATTAATCGAAGAACAGCTGGGTAGATTGGTTACTGATGATCCATCGGTCATTGAAACCACTCTAGAGCAGTATGGTGACCTTGTTCACCTAGACAGCAGAAGTGTGCTTCAAAGAATTGAAATTGTTGATAAATGCTTTGGCCATGACACAGTTGAAGAGATTGTTGATGCTTTGGAAATTGCTGCAAGTGAAACAAAAGATGCATGGTGCATTTCTACCTTAAATAGACTCAAAGAAGCTTGTCCATTGAGCTTGAAGATACGAGAAGGTAGATTTCAGACCCTTGACCAGTGCTTGTCACGTGAGTACCGCATGACTTTACAAGGAATATCTAAGCAGATATCTGGTGACTATTGTGAGGGAGTGAGAGCACGTGTAATAGACAAGGACATGGCACCAAAGTGGGATCCTCCAACCCTGGAAAAGGTATCTGAGGATATGGTGGATCAGTACTTCTTACCTCTAAGTGAATCTGAACCTGATCTAGAGCTACCAACAAAAATTCGTGAAGCATTTTTTTAG 1272 0.4151 MMQKRVNRSMWLLRSVLHSNSRTLSSSSSDVDVLNNVLNNQVLVEGNGYTRMAILNRPSALNAINTNMVFYYSIYYYALLLLLLLLLLLLQATRLHKLYRTWEEDPHIAFLIIKGSGRAFAAGGDIVALYHLINQGKMEVCKEFFRTIYTFIYLIGTYMKPHVALLNGITMGGGAGVSIPGTFRVATDKTIFATPEVLIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSLSARLPLIEEQLGRLVTDDPSVIETTLEQYGDLVHLDSRSVLQRIEIVDKCFGHDTVEEIVDALEIAASETKDAWCISTLNRLKEACPLSLKIREGRFQTLDQCLSREYRMTLQGISKQISGDYCEGVRARVIDKDMAPKWDPPTLEKVSEDMVDQYFLPLSESEPDLELPTKIREAFF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0015 423 Pfam Enoyl-CoA hydratase/isomerase 93 402 IPR045004 -
Lal7g0015 423 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 92 422 IPR032259 GO:0003860
Lal7g0015 423 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 11 74 IPR032259 GO:0003860
Lal7g0015 423 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 11 74 - -
Lal7g0015 423 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 92 422 - -
Lal7g0015 423 Gene3D - 37 419 - -
Lal7g0015 423 SUPERFAMILY ClpP/crotonase 93 388 IPR029045 -
Lal7g0015 423 CDD crotonase-like 42 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0015 Lal-Chr7 151805 157157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g0015 4 423 Acyl Lipid Metabolism Gene Families AT4G31810 56.250 1.45e-176 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0015 K05605 - gmx:100801676 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0015 7 151805 157157 Lal7g0015 7 151805 157157 ECH