Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0013 ATGATTTCATTTTCCATTACAGCTTCGAAGCAGATTCGGTTTTTGCTCAATTCCTTGAACGAAGTCAACTTTGACTCCGTTTTCCATCAACTCATTCAGTTTTCTGAATTCGGAACCGTTGGGAGCATTTTGCTGCTTCAAACATGCTTGGATCACTTTAACATTTCCAGAAGAGATATGAAAGACATGCAGCCCGAGCGGATTCTTGGAGATGTCGTCAAGTACCTCTTGGAGAAACCTAACTTCAATGTAGTGTTTTCTGAGTCCATGAAGAATGTGGAAATCAACGAAAGCTTTTTAGATTTTTTTTGTAATGGATTGAAGTTGTCTTTAATGGAAAAAATTGCCGTTAGCCTTTCTTTATCTGATTCTGAAAATCCCGATGCCAGGCTTTGCGGCAAGACTTTTTGCATGGCTCAGATTGAGGAAGTATTTGCCAATCCTGGTTCTTTGAATTGCCATGAGCTAATTCACGATATTATCATGTTCCTCAAGCAGTCTGAGGGCCTTTCCAAGTATGTGGATTCCTTTATGCAGATCTTATCGCTGGTTCAGTTCAAGGACATGCCGTCCTTTGTTTTGAATCCATTGCTACCTGATGAGATGCGCGAGGCTGAGTTTTTAAGGTGGAATCTGGAGCTGTTCCATGAGAGTGGAGAGAATGATTTTGATGCTATTTTGGCTGACATCCAGAAGGAAATGAACATGGGAGAGATTGTGAATGAATTAGGCTATGGATGTACAGTTGATGTCTCACAGTGCAAGGAAATCTTTTCGCTTTTCACACCTTTAACTGATATCACCCTCTCTAAATTACTTGGTTCTATTGCTCGTACCCATGCTGGGCTGGAGGACAACCAGAGCACATTCTTAACTTTTGGCGCAGCCCTTGGCTACAATTTGTCTGAGTTGCCACCACTGAACTCTTGGAATATCGATGTCTTGATAGATACAATCAAGCAGCTTGCACCTCAGACCAATTGGGTACAGGTTTTTGAAAATCTTGATCATGAAGGATTTTTACTTCCTAATGAAGAAGCATTCTCTTTTCTCATGTCTGTATATAAACATGCCTGCAAGGAGCCATTTCCTCTCCATGCCATCTGTGGGTCTGTATGGAAGAATACTGAGGGTCAACTATCTTTCCTCAAATTTGCAGTATCAGCACCACCAGAAGTGTTTACCTTTGCCCACTCTGCAAGACAACTGGCATTTATCGATGCGGTTAATGGTTCTAAGTTTCAGAATGGACATTCCAACCATGCATGGCTGTGTCTTGACCTTTTGGACATCCTTTGCCAGCTAGCTGAGAGGGGTCATGCCAGTTCTGTCCGATCGGTCTTTGAGTATCCCCTGAAACAATGCCCTGAAATCTTGCTTCTTGGGATGGCACATATCAATACTGCTTACAACTTCTTCCAGCATGAAATATGTCAGATTGTTTTTCCCATGATAGTAAAAAGGGCTGGAGGCAGTGAAATGATTCTACACCTTTGGCATGTTAATCCTAATCTAGTTTTGCGAGGGGTTGTGGATTCTCAAAAGAACGACATAGACATTGTTACAAGAATTGTGGACATCTGCCAGGAGCTAAAGATTCTATCATCTGTGGTCGAAATTATTCCCTCTTACTATGGTATTAGGTTAGCAGCTGTTTCTGGTAGAAAAGAATATATTGACCTCGAGAAGTGGTTGAATAACAATTTAACTACATACAAGGATGTCTTCTTTGCGGAGTGCCTTAAGTTCTTAAAGGATGTCCATCTTACTGGATCACAAGACCTATCTGGCAAATCTTTTCATCAGTCTGGAGCTGTTCTGAATCTATATGCCGAGTCTACTGCTACCTTCTTGAAGGTTCTACTCGAGTCATTTGATTGTTCTTTCTGCTTATTCTGGCCTCATCTTGTTTTCACTTTTATTACAGAATCTGACCATCTCAAACTGCAGGTTCTTAAATCTCATGCTGACTTGGTTACCTCTAGGCAACTTTCTGAGGATCTGGAGAGGTTTCATATATTTATAGATTCAAATCCAAGGTTGCCAAATGGTGGGACTACTGATTCATCTGCTTCAGATGGATATGCGGATGACATTGAAGCAGAAGCAAACTCCTACTTCCATCAAATGTTTTCTGATTCGTTAAGCATGAATGAGATGGTGGAAATGCTTACCCGATTGAAGGAATCTTCTGTGAAGAGGGAGAAATCAATTTTTGAATGCATGATTGCAAATTTGTTTGAGGAGTATCGTTTTTTCCAGAAGTATCCTGAAAGGCAACTCAAAATTGCTGCTGTTCTCTTCGATAATGAGATTGAACTCAAATCTATTTTCATGTGCTTTGATTTCATGATCACCACCATCTTGTGTTTCTGTGCTTTGGCCCACAATCACGGCTTTTGTGTCAAGATTCATCCGCCACCTGGACAAGGAGGTTCTGTGATTAAGCACCAACTTGTAACTCATCTTTCGCTGGGGATTGCTCTTCGTTATGTTCTTGATGCATTACGCAAGCCTGCAGATTCAAAAATGTTTATGTTTGGAAGTCTGGCATTGGAGCAGTTTGTGGATCGTCTTCCTGAGTGGCCTCAGTATTGTAATCATATTCTGCAAATTTCCCATTTGCGCAGTACACATTTGGAGATAGTTGGTTTCATTGAAGAGGCTCTTGCCAGGATTTCCTCTGGTCATGCAGACGGAGATGGGGTGAGCCTTGCTTCTGGTATTAGTAGCCAAAATTCTGCACCAGCCACACTAGGGCATGTAGAGCATAATACATCTAACATCATACAACCTGGGAAGCAACATATGCCTCTGCAGCTTCAACAGAGACGTGACATTCCTCTGGATCATCGTTACAAAGCTTCTGTTGGACTTGGTTCATCTACAGATATAAAACCACTCTTATCTTCTCTAGGGCAATCTTCAGTTGTTACACCTCCTGATGCTTCTAATACCAATAAGTTACATAGCACAGTCAGTGCCTTACCAATGCTAGCTTCTGGTTTTGTCCGTCCTTCCCGTGGAGCCACTTCTGCTAGGTTTGGGTCCGCCTTGAACATTGAAACTTTGGTTGCCGCTGCTGAGAAAAGAGAAACTCCCATTGAGGCTCCAGGATCAGAGGTTCAGGACAAGATATCATTTATAATTAATAACATTTCTGTTGCTAACATTGATACTAAAGCTAAAGAGTTCACTGAAATTTTGAAAGAACAGTACTATCCATGGTTTGCGCAGTATATGGTTATGAAAAGGGCGAGCATTGAGCCTAATTTCCATGATTTGTACCTGAAGTTCCTAGATAAAGTTAATTCAAAGGCTTTGAACAAAGAGATTGTCCAGACAACTTATGAAAATTGCAAGGTTCTTTTAGGATCAGAGCTTATAAAGTCAAGTTCAGAAGAGCGTTCTTTGCTTAAAAATCTGGGAAGCTGGCTAGGAAAGTTAACGATTGGGCGGAATCAAGTACTGAGGGCTCGTGAAATAGACCCAAAATCTTTGATTATAGAGGCATATGAGAAGGGACTGATGATTGCTGTTATTCCATTTACTTCAAAGATCCTCGAACCATGCCAAAGCAGTCTTGCATATCAACCCCCTAATCCTTGGACAATGGGCATTTTGGGATTGCTTGCTGAGATTTATTCAATGCCGAACTTGAAAATGAACCTCAAGTTTGACATAGAGGTTTTATTCAAAAATTTAAGCGTAGATTTAAAGGATGTTACCCCTACTTTTCTCCTGAAGGATCGTAAAAGAGCAATTGAAGGAAATCCTGATTTCTCTAATAAAGATGTAGGATCTTCTCAAGCACAAATGATTTCTGATATCAAATCTGGCCCTGTACCTCCAGTAAAGCAAGTGGACTTACCGCTCGAGGTTACAAATCTATCTAATACTGGGGGTCATCCACATATGCTATCTCAGTATGCTGGTCCTCTTCATATTTCTACGGGGACATTGATGGAGGAGGAGAAGGTAACACCTCTGGGCTTGTCTGATCAACTTCCCTCTGTTCAAGGGCTGTTACAAGCAACTCCTACCCCAGCACCCTTTTCTATTAGCCAGATCCCATCACAGATACCTAATATTGGGACTCATGTCATTATCAATCAAAAGCTCAGTAGTTTTGGGTTGCAAATGCATTTTCAGAGAGCGGTACCCATTGCAATGGATAGAGCTATCAAAGAGATTGTGTCTAGTATTGTTCAGCGTAGTGTTTCCATAGCAACACAAACAACAAAGGAGCTTGTTTTAAAGGATTATTCTGTGGAATCAGATGAGAATCGTATATTAAATGCTGCACACTTGATGGTTGCTAGTCTGGCTGGGAGTTTAGCTCATGTTACATGCAAAGAACCTCTTCGAGCATCAATATCAAGTCAGCTGAGGACTTCACTTCAGAATTTAAGTATTGGAAATGAAATTTTGGAGCAGGCAGTCCAACTTGTCACCAATGATAATCTTGATCTTGGTTGTGCAGTCATTGAGCAAGCTGCTACTGATAAGGCAATAAACACTATTGACACAGATATTGGTCAACAACTTTCTTTGAGAAGGAAGCATCGAGAAGGTATGGGTTCTACATTTTTTGATGCAAACATGTATACACAAGGTTCTATGGGTGGCGTACCAGATTACCTTCGTCCCAAACCTGGTCAGCTGTCCCTCTCACAACAGCGTGTCTATGAGGACTTTGTTCGGCTTCCCTGGCAAAATCAGTCTAGCCAGACCTCAAATTCTATGTCTTCTGTTCAATCTGGCAATGCTGGCAATGCTGGTTCTGTAAGCACGGGATATGAAGGGGTCTCTCGACAATTAGATGATATGGCCGAATCTAACCTGGCTTCACAATTTAGTGCTTCCTCAATTCACAATAGAGCTGCTGATAGTTCTTCCCAGCTTAGCGTGGAGAAAGATTCTGTTGCCTCCTTCCCTTCAACTGCCTCCACCCCTGAATTGCCTCAAGTTGATTCTTCTGATACTGTGCAAGAATCTGGAGCTTCTTCCCAACAACTAGTTTCATCAGGTGCTGTGGAGCGTTTTGGAAGTAGCTTCTTGGAATCTTCTCTCACTACAAGGGATGCCCTTGATAAATACCAAATTGTCGCTCAAAAGTTGGAAGCTTTGGTTAACAATGATTCCGAGGTAGCAGAAATACAGGGGGTCATTTCTGATGTTCCTGAAATCATACTCAAATGTGTTAGTCGAGATGAGGCTGCTTTAGCTGTGGCTCAAAAGGTTTTCAAACTTTTGTATGATAATGCATCAAACAACATTCATGTCAGTGCTCATCTCGGGATCCTGACTGCCATTCGTGATGTTTGCAAGCTTGCTGTGAAGGAACTTACTAGTTGGGTAATTTACTCGGACGAAGAAAGGAAATTTAACAAGAATATCACTGTCGGCCTCATCCGCAGTGAATTGCTAAATCTTGCCGAGTACAATGTTCATATGGCAAAACTTATTGATGGTGGAAGGAACAAGGCTGCTACAGAGTTTTCCATCTCTCTTCTACAGACCTTGGTTATTGAGGAACCTAAAGTCATTTCAGAACTTCACAATCTCGTTGATGCTTTGGCGAAGGTTTGTATTTGTTCATATGAGCTTATGCATTATTACCGTGCCCTCAGTTATTTACCACATTTTATTTTGAAGCTTGCTACGAAGCCTGGATCACCTGAATCATTACCGCAGCTGGTTGAGATGGTTAAGAATCCCGCTGCTAGTGCTGCGGCTCTATATGCTGGTAATGCTGGAAAGGACGATAAGGCTAGACAATCAACAGACAACAAGGATCCTGGTCTGCTCGCAGCAAACAGGGAAGAGTTAATCACTGTAGAGCCTGTTGAACCAGATCCTGCTGGATTCCGTGAGCAGGTTTCAATGGTGTTTGCGGAATGGTATAGGATATGTGAACTTCCTGGTGCCAATGATACAGCTTCTGCTCACTTCATCTTACAGTTGCATCAAAATATTTTGCTTAAGGGGGATGATGTAACAGATCGCTTTTTCCGGCTGCTGACGGAACTTTCTGTTGCACATTGCTTATCTACTGAGGTTATCAATTCAGGTGTAATGCAATCTCCTCAACAGCTGCAGCCAATGTCATTTCTTGCAATTGATGTCTATGCAAAGCTTGTCTTCTCAATCTTGAAGGGATCAAGCAAACTCATTCTTCTTTCCAAGATTCTGGCAGTGACTGTCAGATTCATTCTAAAGGATGTGGAGGAGAAGAAGACGTCTTTTAATCCAAGACCATATTTCAGATTGTTCATTAACTGGCTTCTAGATCTTGGTTCACTTGAGCCTGTTACTGATGGTGCAAATCTGCAGATTTTGACCGCTTTTGCCAACGCATTTCATGCTTTGCAGCCCCTCAAAGTCCCTGGATTCAGTTTTGCATGGCTTGAGTTGATAAGTCATAGGAGCTTCATGCCAAAAATGCTGACTGGTAATGGTCAAAAAGGTTGGCCATATATCCAAAGGTTGCTTGTGGATCTTTTCCAATTTATGGAACCTTTTCTGAGGCATGCTGAACTTGGTGACTCTGTTCGACTTCTCTATAAAGGCACACTTAGAGTGCTCTTGGTTCTACTTCATGACTTCCCAGAGTTCCTCTGTGACTATCACTTTACCTTTTGTGATGTTATTCCTCCGAGTTGCATACAAATGCGAAATATCATTCTTAGTGCTTTTCCGCGTAGTATGCGTCTGCCAGATCCATCCACTCCCAATTTGAAGATTGATTTGCTTCAAGAAATAACTCAACCACCTCGCATTCTTTCTGAGGTTGATGCTGTGCTTAAAGCAAAGCTGATGAAGGCTGATGTAGATGAATACCTTAAGACAAGGCAGCAGAATATTTCATTTTTGTCTGAACTGAAGGAGAAGCTACTCCTCTCACCCAGTGAAGCTGGATCTGCTGGGACTCGTTACAATGTGCCTTTGATCAACTCACTTGTGCTCTATGTTGGAATGCAGGCAATCCAGCAACTGCAGGGCCAAACTCCCCATGCTCAATCATCAGCAAATGCTTTCCCATTGGCTGTGTTTTCTGTCGGCGCTGCATTGGATATTTTCCAGACACTGATTATGGACTTGGACACCGAAGGCCGCTACCTCTTCTTAAATGCTGTTGCCAACCAACTTCGCTACCCAAATACGCATACACACTACTTTTCCTTCATCCTTTTGTACTTGTTTGCAGAATCAAACCAGGAAATAATCCAAGAACAAATTACAAGAGTGTTGTTAGAGCGGCTAATTGTGAATAGACCTCATCCATGGGGCCTCCTCATTACATTCATTGAGCTCATCAAGAATCCTAGGTACAATCTTTGGAACCGGACTTTCATAGGATGCGCTCCGGAGATTGAAAAACTTTTTGAATCAGTGTCAAGATCCTGTGGTGGTCCTAAACCAGTGGAAGAGAGTATGGTCCCTGGTTGGGTCTAA 7458 0.4194 MISFSITASKQIRFLLNSLNEVNFDSVFHQLIQFSEFGTVGSILLLQTCLDHFNISRRDMKDMQPERILGDVVKYLLEKPNFNVVFSESMKNVEINESFLDFFCNGLKLSLMEKIAVSLSLSDSENPDARLCGKTFCMAQIEEVFANPGSLNCHELIHDIIMFLKQSEGLSKYVDSFMQILSLVQFKDMPSFVLNPLLPDEMREAEFLRWNLELFHESGENDFDAILADIQKEMNMGEIVNELGYGCTVDVSQCKEIFSLFTPLTDITLSKLLGSIARTHAGLEDNQSTFLTFGAALGYNLSELPPLNSWNIDVLIDTIKQLAPQTNWVQVFENLDHEGFLLPNEEAFSFLMSVYKHACKEPFPLHAICGSVWKNTEGQLSFLKFAVSAPPEVFTFAHSARQLAFIDAVNGSKFQNGHSNHAWLCLDLLDILCQLAERGHASSVRSVFEYPLKQCPEILLLGMAHINTAYNFFQHEICQIVFPMIVKRAGGSEMILHLWHVNPNLVLRGVVDSQKNDIDIVTRIVDICQELKILSSVVEIIPSYYGIRLAAVSGRKEYIDLEKWLNNNLTTYKDVFFAECLKFLKDVHLTGSQDLSGKSFHQSGAVLNLYAESTATFLKVLLESFDCSFCLFWPHLVFTFITESDHLKLQVLKSHADLVTSRQLSEDLERFHIFIDSNPRLPNGGTTDSSASDGYADDIEAEANSYFHQMFSDSLSMNEMVEMLTRLKESSVKREKSIFECMIANLFEEYRFFQKYPERQLKIAAVLFDNEIELKSIFMCFDFMITTILCFCALAHNHGFCVKIHPPPGQGGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFMFGSLALEQFVDRLPEWPQYCNHILQISHLRSTHLEIVGFIEEALARISSGHADGDGVSLASGISSQNSAPATLGHVEHNTSNIIQPGKQHMPLQLQQRRDIPLDHRYKASVGLGSSTDIKPLLSSLGQSSVVTPPDASNTNKLHSTVSALPMLASGFVRPSRGATSARFGSALNIETLVAAAEKRETPIEAPGSEVQDKISFIINNISVANIDTKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQTTYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLSVDLKDVTPTFLLKDRKRAIEGNPDFSNKDVGSSQAQMISDIKSGPVPPVKQVDLPLEVTNLSNTGGHPHMLSQYAGPLHISTGTLMEEEKVTPLGLSDQLPSVQGLLQATPTPAPFSISQIPSQIPNIGTHVIINQKLSSFGLQMHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYSVESDENRILNAAHLMVASLAGSLAHVTCKEPLRASISSQLRTSLQNLSIGNEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTDIGQQLSLRRKHREGMGSTFFDANMYTQGSMGGVPDYLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQTSNSMSSVQSGNAGNAGSVSTGYEGVSRQLDDMAESNLASQFSASSIHNRAADSSSQLSVEKDSVASFPSTASTPELPQVDSSDTVQESGASSQQLVSSGAVERFGSSFLESSLTTRDALDKYQIVAQKLEALVNNDSEVAEIQGVISDVPEIILKCVSRDEAALAVAQKVFKLLYDNASNNIHVSAHLGILTAIRDVCKLAVKELTSWVIYSDEERKFNKNITVGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLVIEEPKVISELHNLVDALAKVCICSYELMHYYRALSYLPHFILKLATKPGSPESLPQLVEMVKNPAASAAALYAGNAGKDDKARQSTDNKDPGLLAANREELITVEPVEPDPAGFREQVSMVFAEWYRICELPGANDTASAHFILQLHQNILLKGDDVTDRFFRLLTELSVAHCLSTEVINSGVMQSPQQLQPMSFLAIDVYAKLVFSILKGSSKLILLSKILAVTVRFILKDVEEKKTSFNPRPYFRLFINWLLDLGSLEPVTDGANLQILTAFANAFHALQPLKVPGFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGDSVRLLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQPPRILSEVDAVLKAKLMKADVDEYLKTRQQNISFLSELKEKLLLSPSEAGSAGTRYNVPLINSLVLYVGMQAIQQLQGQTPHAQSSANAFPLAVFSVGAALDIFQTLIMDLDTEGRYLFLNAVANQLRYPNTHTHYFSFILLYLFAESNQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNLWNRTFIGCAPEIEKLFESVSRSCGGPKPVEESMVPGWV 2485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0013 2485 Pfam CCR4-Not complex component, Not1 2097 2466 IPR007196 -
Lal7g0013 2485 Gene3D - 1946 2235 - -
Lal7g0013 2485 MobiDBLite consensus disorder prediction 1573 1600 - -
Lal7g0013 2485 Pfam CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 1381 1523 IPR024557 -
Lal7g0013 2485 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 812 2484 IPR040398 GO:0017148|GO:0030015
Lal7g0013 2485 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 10 621 IPR040398 GO:0017148|GO:0030015
Lal7g0013 2485 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 649 773 IPR040398 GO:0017148|GO:0030015
Lal7g0013 2485 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 812 892 IPR032193 -
Lal7g0013 2485 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 686 770 IPR032193 -
Lal7g0013 2485 Gene3D - 1007 1257 - -
Lal7g0013 2485 Pfam CCR4-NOT transcription complex subunit 1 CAF1-binding domain 1035 1254 IPR032191 -
Lal7g0013 2485 Gene3D - 811 895 IPR038535 -
Lal7g0013 2485 Gene3D - 685 791 IPR038535 -
Lal7g0013 2485 Gene3D - 2236 2465 - -
Lal7g0013 2485 MobiDBLite consensus disorder prediction 1627 1674 - -
Lal7g0013 2485 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 476 621 IPR032194 -
Lal7g0013 2485 PANTHER BNACNNG58980D PROTEIN 649 773 - -
Lal7g0013 2485 PANTHER BNACNNG58980D PROTEIN 10 621 - -
Lal7g0013 2485 PANTHER BNACNNG58980D PROTEIN 812 2484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0013 Lal-Chr7 119488 140680 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0013 K12604 - gmx:100783935 3885.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0013 7 119488 140680 Lal7g0013 7 119488 140680 ECH
Lal14g0072 14 855767 877084 Lal7g0013 7 119488 140680 LSH