Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1648 ATGGCGGCTGAGCCCAAGACACTCCCACCGCCGCCGGAACCTCCGATCGCCACCGCAACCGCCTTAGAACCGGTGGTTGAACCGACAACAGCAGTGCAACCTTCTACTGAGAACTCTGGCCCAACTCGGAAACGGCAGCGCCGTCCTAGCGTTCGATTAGGTGAGATCGGAAACCAACGCGCCGCCGATAAAGCGCATAAATCCGAGACGCGCCGACTTAACATGCCGCCTTGGAGCTGGAAGACTCCGAAAGAAGCTTCTAGAGCCGCGAAGGGTCGATTTCTAACGAATATCGCAAACGGTTTCGAAGAGAGTAACGGAATCTCCGAATTCGCTAATCGAAGAGGCAAGGCTAAGCGAGGTTCAACCTCGACGAAGCGGTTGAGATCGAATCAATTTCCGAAAACAACAACAGATGATGCTGATGATGACGGAGACGAAGGAATTAGGGATTTCAATAACGATCAAAGTCCGGTGAATTCGGTTCAACAAAATTTTCTTGAGAATCTTGATGATGATGAAGATTATCATGCTAGGGATTTGGAAGACGACGTTGAATCATCGGATTCGAGGGAATGGAAGAGTAACAAGAAGTGTGAATTTGTGAGGTCTTGGTTAATGGAATTAGGGTTAAGTAAGTATGCTCCTATATTTGAGATTCATGAAGTTGATGATGAATTGCTTCCATTATTGACTTTGGAGGATCTTAAGGATATGGGAATCAATGCTGTTGGTTCTAGAAGGAAAATGTACACTGCAATTCAGAAGCTTCAGAAAGGCCTAGGGCTCATATCGAGTCACGTGTGTTCTGACCATCGGTTAACTAAGGGAACGATGTGTTTCCAAGAGTCGGCTCGGTTGGTTAAGCTGCGGGGCATGAAGTGTGAGCTCTCGGTTGCAGGGTCCAAGACTCAAGTCACCGCAGCTACTGGCCAGCAGGCTCAAAATTGCAGTTAA 957 0.4796 MAAEPKTLPPPPEPPIATATALEPVVEPTTAVQPSTENSGPTRKRQRRPSVRLGEIGNQRAADKAHKSETRRLNMPPWSWKTPKEASRAAKGRFLTNIANGFEESNGISEFANRRGKAKRGSTSTKRLRSNQFPKTTTDDADDDGDEGIRDFNNDQSPVNSVQQNFLENLDDDEDYHARDLEDDVESSDSREWKSNKKCEFVRSWLMELGLSKYAPIFEIHEVDDELLPLLTLEDLKDMGINAVGSRRKMYTAIQKLQKGLGLISSHVCSDHRLTKGTMCFQESARLVKLRGMKCELSVAGSKTQVTAATGQQAQNCS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1648 318 SUPERFAMILY SAM/Pointed domain 199 259 IPR013761 -
Lal6g1648 318 Pfam SAM domain (Sterile alpha motif) 196 257 IPR001660 GO:0005515
Lal6g1648 318 Gene3D - 189 261 IPR013761 -
Lal6g1648 318 MobiDBLite consensus disorder prediction 112 160 - -
Lal6g1648 318 PANTHER SCP160 1 261 - -
Lal6g1648 318 MobiDBLite consensus disorder prediction 1 92 - -
Lal6g1648 318 SMART SAM_4 194 260 IPR001660 GO:0005515
Lal6g1648 318 MobiDBLite consensus disorder prediction 1 18 - -
Lal6g1648 318 CDD SAM_superfamily 202 256 - -
Lal6g1648 318 PANTHER PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE 1 261 - -
Lal6g1648 318 ProSiteProfiles SAM domain profile. 197 260 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1648 Lal-Chr6 19253259 19257002 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1648 - - vra:106758807 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1648 6 19253259 19257002 Lal6g1648 6 19253259 19257002 ECH