Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1140 ATGGGTCAAGAATTAGAACAATCTATTCCAAATAATGAAACACCAAACCTTATTCATAATAACGTTTCTTCAACCAAAACACTCACAATTGTTCAACCTCATTCTTTTCTCCCAAAACCAACACCACCCAGAATTAGTAGTAATAGTAATAATAATAATAAAAATAATGTTTCTAGTTCAAACCTGAAAAACGATGTCGTTTCCTCAACCCTCGCTAAGTTTAAGTTCTTAAAGCAACGCAGCAACGAGCTTTCATCGGTGATATCAAGAAGCGTTTTATCTCTGAAGCATTCGAGTGATGAACAAAACGACTCGTCGTTTAATAACTCAATTCATGACGTAACGGAATTCACACTTTCGGGTCTCAAGGTTGTGGTGGAAGTGAAAAACGACGCGTCGTTTTCGTTCGGAAGTGTGAGTTTCTTCTCTAGGTCTAATTGCAGAGACTGTTCCGCGGTTCGAAAATTCTGCAGAGAAAAACGACTTCGTTTCGTGGAGATCAACGTTGATGTGTTCCCGGAGCGAGAGAAGGAGCTATTCGAAAGAACCGGTGGTTCAACGGTGCCGAAGATTTTCTTCAACAAGAAACTTATCGGTGGTTTGGTTGAGCTGAATTTGCTGAAAAGAAACGGCGAGTTGGAGAAGGCGTTAACGGAGATGGCGGCGGTTAGTGAGAAATGGTGTGACGGTGGTGCACTGGCGGCGCCGGAGTACGGGTATGCTGAGGTGGCGGAGGAGGAGGAGGAGGAGGAAGGGGAGATGGTGAGGGTGGTGAGAGTAATGAGGCAGAGGTTGATGATTCAGGACCGTTGGATCAAGATGAAGATCGTGAGGAATTGTTTTGCTGGGAATGAGTTAGTTGATCTTCTCATTCATCATCTTCTGTGTACTCGTGTTAAGGCTGTTGAGATCGGAAAACGGTTATGCAAGAAGCACTTCATCCATCATGTTTCTGGGATAAATGATTTTGTGGAAGGAAACCACTTCTATAGATTTCTGGAGCATGAACCATTTATTCCCAAATGTTTTAATTTCCGTGGTGCCACAAATGATAGTGAACCAAAGACTGCAACTGCAATTTGTGATAGGCTTACCAAGATTATGTCTGCCATTCTCGAGTCTTATGCTTCTGATGATAGGCTACATGTTTATTATGAGGCCATTAGAAAAAGCGAAGAATTTAGGAGATATGTAAACATGACCCAGGATCTGCAGCGTGTGAACCTCTTGGAATTATCAGAAAACGAGAAGCTTGCATTCTTCTTAAATTTGTATAATGCCATGGTCATCCATGCTGTTATAAGAGTAGGGTATCAAGAAGGTGTAATTGACAAAAATTCCTTCTCTGATTTCCAGTATTTGATTGGAGGACATCCTTATTCACTTAGTGCCATTAAAAATGGTATCCTCAGATCCAATCGAAGGTCACCATATTCCTTAGTAAAGCCCTTTGGCAATGGAGATGGAAGATTAGAGCTTGTTCTTGTCAAAATGAATCCTTTAATTCATTTTGGACTTTGTGATGCGACAAAATCGAGCCCGGTCCCGAGGTTCTTCTCACCAGATAGAGTGTCTGATGAGCTGAGATGTGCTGCTAGAGAGTTCTTTGCCAAGGATGGAATTGAAGTGGACCTAGAGAAGAGGACAGTTCATCTCACTCCAATTTTCAAGTACACAATGGATTTTGGACAAGAAAGAGATATACTAAAGTGGATAATAAGTTACTTGGATGCAAATAAAGCTGGTCTTTTGACACATCTCTTAGATGATGGTTGTCCAGTTAATATCTCATACAAAAAATTTGATTGGTCAGTGAATTATTGA 1824 0.4101 MGQELEQSIPNNETPNLIHNNVSSTKTLTIVQPHSFLPKPTPPRISSNSNNNNKNNVSSSNLKNDVVSSTLAKFKFLKQRSNELSSVISRSVLSLKHSSDEQNDSSFNNSIHDVTEFTLSGLKVVVEVKNDASFSFGSVSFFSRSNCRDCSAVRKFCREKRLRFVEINVDVFPEREKELFERTGGSTVPKIFFNKKLIGGLVELNLLKRNGELEKALTEMAAVSEKWCDGGALAAPEYGYAEVAEEEEEEEGEMVRVVRVMRQRLMIQDRWIKMKIVRNCFAGNELVDLLIHHLLCTRVKAVEIGKRLCKKHFIHHVSGINDFVEGNHFYRFLEHEPFIPKCFNFRGATNDSEPKTATAICDRLTKIMSAILESYASDDRLHVYYEAIRKSEEFRRYVNMTQDLQRVNLLELSENEKLAFFLNLYNAMVIHAVIRVGYQEGVIDKNSFSDFQYLIGGHPYSLSAIKNGILRSNRRSPYSLVKPFGNGDGRLELVLVKMNPLIHFGLCDATKSSPVPRFFSPDRVSDELRCAAREFFAKDGIEVDLEKRTVHLTPIFKYTMDFGQERDILKWIISYLDANKAGLLTHLLDDGCPVNISYKKFDWSVNY 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1140 607 Pfam Glutaredoxin 140 198 IPR002109 -
Lal6g1140 607 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 12 606 - -
Lal6g1140 607 ProSiteProfiles DEP domain profile. 261 334 IPR000591 GO:0035556
Lal6g1140 607 SUPERFAMILY Thioredoxin-like 137 220 IPR036249 -
Lal6g1140 607 SMART DEP_3 261 334 IPR000591 GO:0035556
Lal6g1140 607 Pfam Protein of unknown function, DUF547 411 535 IPR006869 -
Lal6g1140 607 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 265 332 IPR000591 GO:0035556
Lal6g1140 607 Gene3D - 246 389 IPR036388 -
Lal6g1140 607 ProSiteProfiles Glutaredoxin domain profile. 127 224 - -
Lal6g1140 607 MobiDBLite consensus disorder prediction 41 61 - -
Lal6g1140 607 Gene3D Glutaredoxin 136 221 - -
Lal6g1140 607 PANTHER DISHEVELLED/EGL-10/LECKSTRIN DOMAIN PROTEIN 12 606 - -
Lal6g1140 607 MobiDBLite consensus disorder prediction 33 61 - -
Lal6g1140 607 CDD DEP 265 331 - -
Lal6g1140 607 SUPERFAMILY "Winged helix" DNA-binding domain 252 350 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1140 Lal-Chr6 8658462 8666224 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1140 - - gmx:100794983 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1140 6 8658462 8666224 Lal6g1140 6 8658462 8666224 ECH