Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1006 ATGGGTTCTTCGGAATCTATGATCCCATTAAAGAAAGGTAGCTTGTTTGGTTCTCAACCAGGTAGAAAAGAGAAGCACCCTTTTTCACAAAGGTTCAGATCCAGCTTCTCACGTTTGATGTTCAAGAAACTTGATTACATTCAATGGATTTGCACTGTGGTAGTGTTTTTGTGTTTGGTTGTTGTTTTCCAAATGTTTTTGCCTATTTCTGTTGTGGAAAAGTCAGGGGATTCATTCAGAGCTGTGAGGATGCGTTCTGGGAATGTGTCACACTATAAGGACATTAAGAATTATGTGTTGGACATTGAGAATTATGCATTGGACATTGGGGAGGATGCTATTTTTGTTCCGAAGATTTCGGAGAAATTTCGCAGGAGGGATGTTGGTATGGACATGAATTTGTTGAACCATACGGTGTTGCATTTTGGGTATAGGAAGCCTCAGCTAGCACTGGTATTTGGAGAACTGTTGGTTGATTCACAAGCATTGCTTATGGCAACAATTGCAGCTGCTTTGCTAGAGATAGGTTATGGAATCCAGGTCTTTTCAATTGAAGATGGACCAGGGCATAATGTGTGGATAAATTTAACAATTCCAGTCACTGTCATTCAAACTTGTAGCAAGGCTGACAATGCTGTAGACTGGCTAAACTACGATGGCATAATTGTTAGCTCTCTTGAAGCCAAGGGTGCCTTTTCTTGTTTTTTGCAGGAACCTTTCAAGTCTATACCTCTTATATGGATCATTCATGAAAATGCTCTTGCTTATCGTTCAAAGCAATATACTGCTAGTGGGAAGACTGGACTTCTGAATGATTGGAGAAGAGCCTTCAACCGTTCAACAGTTGTTGTCTTTCCAAACTATGCCTTGCCGATGATTTACTCCACCTTTGATGCTGGAAATTTTTATGTCATTCCTGGTTCCCCTGCTGAATCATTAGACGCAGATGCATTTATGGCGATACGAAAACATGATTTGCGCATCGGAATGGGTTATGGACGAGAAGATTTGGTTGTTGCAATTGTTGGAAGTCAGTTTTTGTACAAGGGCATGTGGTTGGGGCATGCCATTGTTTTGCAGGCTTTATCACCACTTCTGGCAGACTTCCCATCAAGCAAACATAATTCCAGTGCACAACTACGAATTATTGTTCATAGTGGAGAATTAACAAATAACTACAGTGTTGCTCTTGAGACCATGGCTCATAGCTTGAAATATCCAAGAGGTATCATCGAGCACATAGCTGGAGATTTGAATACAGATTCTGTTCTTGCAACAGCGGATGTTGTGATATATGGATCCCTCCTCGAAGAGCAATCTTTTCCAGATATTTTGATGAAAGCCATGTGCTTTGAGAAACCAATTGTTGCTCCAGATATTCCCATGATCAGAAAATATGTTGATGACAGGGTGAATGGCTACCTTTTCCCGAAGGATAGTAGTAGACTTCTGAGACGAATTGTATTGGAAGTGATATCAAATGGCAAAATATCACCACAGGCTCGTCACATTGCCTCAATAGGGAGAAGCACCGCAAAGAACCTTATGGTTTCAGAAGCAATTGAGGAATATGCATCCTTAATTCAGAATATTCTTCGGTTTCCATCAGAGGTTGTTCCTCCCAAGGCTGTTTCAGAAATATCCCCCAATGTAAAAGAACAATGGCTGTGGCATTTGTTTGAAGCAGTTCCAAAAGTAACATATGAAAATAGGACAACAAGAAGTCACACTTTTTTAGATAAATATGAGGCCAAGTGGAATCTTTCTCAAAATAATAGATCCACTATTATTGTTTCATCAAATGATTCATTTGTATATAGCATATGGGAAGAAGAGACGTTAATTCAGATGGCTATTACAACAAAAAGGAGAGAGGATGAAGAGTTGAAGGATAGAACAGATCATTCATATGGAACATGGGAAGATGTATATCGAAATGCTAAGAAGGTTGATAGGTTAAAGAATGATTTGCATGAAAAGGATGATGGAGAGCTTGAGCGAACGGGACAACCACTATGCATTTATGAACCTTACTATGGTGAAGGATCCTGGCCTTTTCTGCATCAAAGATCTCTTTATCGTGGAGTTGGCCTGTCCACTAAAGGTCGAAGACCGGGGAGAGATGATGTTGATGCACCGTCTCGTCTTCCACTGCTTACTAACACTTACTATCGAGATGTACTTGGTGAATATGGAGCCTTCTTTGCAATTGCAAACATGATTGATCGTTTACACAAAAATGCCTGGGTTGGATTTCAGTCTTGGAGAGCAACAGCAAGGAAGGCATCCTTATCCACAACTGCTGAAAATGCATTATTAGGTGCTATCCAATCTAAAAAGTTTGGGGATGCACTTTATTTTTGGGTGCGCATGGATACGGATCCTCGGAACCCTTTGCAGAAGGACTTTTGGTCATTTTGTGATGCCATTAATGCAGGAAATTGCAAGTTTGCTTTCTCAGAAGCCATGAGGAGGATGTATGGGTTAAAAGATGATACGCATTCTTTGCCGTCTATGCCTATAGATGGCGACACTTGGTCTGTCATGCAGAGTTGGACTCTGCCTACAAGATCCTTTTTAGAATATGTAATGTTCTCCAGAATGTTTGTCGATGCATTGGATATGCAGATGTATGATGAGCACCATTCAACTGGACACTGCCCTTTGAGTTTGTCAAAAGATAAGCATTGCTATTCAAGGCTTCTCGAGCTACTAGTAAATGTGTGGGCATACCACAGTGCAAGGAGGATGGTGTATGTGAACCCGGAAACAGGTGTAATGCAGGAACAACACAAGTTCAAGAGCCGAAGGGGTCAAATGTGGATCAAATGGTTCTCATACAACATACTTAAGAGCATGGATGAGGACTTGGCGGAGTTATCAGATTCCAGAGATCCAAGCAGGCATTGGTTGTGGCCATTAACAGGTGAAGTATTTTGGCAAGGTTTATATGAGAGAGAGAAAAATTTAAGGCAGAAGCAGAGGGAAAAGAGGAAGCAAAATAGTTTAGAAAAACAAGATAGAATAAGGAGGCGTCACCGCCAGCAAGTAATAGGGAAATACGTTAAGCCCCCGCCCGAATGGGAAGAAAGCTCTAATTCATCTTTGCTTGCAGTAAAAGCATCAAGATCTACTATAAACACCATTCTTAAGTAG 3156 0.4084 MGSSESMIPLKKGSLFGSQPGRKEKHPFSQRFRSSFSRLMFKKLDYIQWICTVVVFLCLVVVFQMFLPISVVEKSGDSFRAVRMRSGNVSHYKDIKNYVLDIENYALDIGEDAIFVPKISEKFRRRDVGMDMNLLNHTVLHFGYRKPQLALVFGELLVDSQALLMATIAAALLEIGYGIQVFSIEDGPGHNVWINLTIPVTVIQTCSKADNAVDWLNYDGIIVSSLEAKGAFSCFLQEPFKSIPLIWIIHENALAYRSKQYTASGKTGLLNDWRRAFNRSTVVVFPNYALPMIYSTFDAGNFYVIPGSPAESLDADAFMAIRKHDLRIGMGYGREDLVVAIVGSQFLYKGMWLGHAIVLQALSPLLADFPSSKHNSSAQLRIIVHSGELTNNYSVALETMAHSLKYPRGIIEHIAGDLNTDSVLATADVVIYGSLLEEQSFPDILMKAMCFEKPIVAPDIPMIRKYVDDRVNGYLFPKDSSRLLRRIVLEVISNGKISPQARHIASIGRSTAKNLMVSEAIEEYASLIQNILRFPSEVVPPKAVSEISPNVKEQWLWHLFEAVPKVTYENRTTRSHTFLDKYEAKWNLSQNNRSTIIVSSNDSFVYSIWEEETLIQMAITTKRREDEELKDRTDHSYGTWEDVYRNAKKVDRLKNDLHEKDDGELERTGQPLCIYEPYYGEGSWPFLHQRSLYRGVGLSTKGRRPGRDDVDAPSRLPLLTNTYYRDVLGEYGAFFAIANMIDRLHKNAWVGFQSWRATARKASLSTTAENALLGAIQSKKFGDALYFWVRMDTDPRNPLQKDFWSFCDAINAGNCKFAFSEAMRRMYGLKDDTHSLPSMPIDGDTWSVMQSWTLPTRSFLEYVMFSRMFVDALDMQMYDEHHSTGHCPLSLSKDKHCYSRLLELLVNVWAYHSARRMVYVNPETGVMQEQHKFKSRRGQMWIKWFSYNILKSMDEDLAELSDSRDPSRHWLWPLTGEVFWQGLYEREKNLRQKQREKRKQNSLEKQDRIRRRHRQQVIGKYVKPPPEWEESSNSSLLAVKASRSTINTILK 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1006 1051 Coils Coil 986 1006 - -
Lal6g1006 1051 Pfam Glycosyl transferases group 1 417 499 IPR001296 GO:0016757
Lal6g1006 1051 Gene3D Glycogen Phosphorylase B; 314 514 - -
Lal6g1006 1051 MobiDBLite consensus disorder prediction 991 1034 - -
Lal6g1006 1051 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 165 532 - -
Lal6g1006 1051 CDD GT4_PimA-like 165 529 - -
Lal6g1006 1051 MobiDBLite consensus disorder prediction 991 1011 - -
Lal6g1006 1051 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 1033 - -
Lal6g1006 1051 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 1033 - -
Lal6g1006 1051 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1006 Lal-Chr6 7169515 7177534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1006 - - lang:109360682 1989.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1006 6 7169515 7177534 Lal6g1006 6 7169515 7177534 ECH
Lal6g1006 6 7169515 7177534 Lal22g0898 22 7071177 7078851 LSH