Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1001 ATGTCTCAGCTGTTGGATAAGGCCAAGAACTATGTGTCGGAGAAGATTAGCGACGTGGCGAAGCCTGAGGCAAGTGTTAGCAACGTGGATTTTAAGCGCGTGAGTGGGAATAACGTGGAGTTCTTGGCCATGGTCTCCGTTCGTAATCCTTACTCTACTCCCATCCCAATCTGTGAGATTAAGTATTCTTTCAAAAGCGCAGATAGGGAGATAGCATCAGGTACAATACCAGACCCAGGATCATTGAAGGCAAAGGACACAACAATGGTAGATGTACCAGTGAAGGTACCATACAGCATATTGATGAGTTTGGCTAAGGACATTGGAGCTGATTGGGACATTGATTATCAATTAGATCTTGGACTCATTATTGATATTCCTGTTATGGGTAACATCACAATTCCACTTTCTCAAAAGGGAGAGGTTAAGCTACCAACCCTTTCTACCATGTTTGCCTAG 459 0.4379 MSQLLDKAKNYVSEKISDVAKPEASVSNVDFKRVSGNNVEFLAMVSVRNPYSTPIPICEIKYSFKSADREIASGTIPDPGSLKAKDTTMVDVPVKVPYSILMSLAKDIGADWDIDYQLDLGLIIDIPVMGNITIPLSQKGEVKLPTLSTMFA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1001 152 Gene3D - 17 151 - -
Lal6g1001 152 SMART why 24 141 IPR013990 GO:0009269
Lal6g1001 152 SUPERFAMILY LEA14-like 1 150 - -
Lal6g1001 152 Pfam Late embryogenesis abundant protein 45 140 IPR004864 -
Lal6g1001 152 PANTHER - 1 152 IPR045043 -
Lal6g1001 152 PANTHER DESICCATION PROTECTANT PROTEIN LEA14 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1001 Lal-Chr6 7133259 7135010 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1001 - - gmx:547533 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1001 6 7133259 7135010 Lal6g1001 6 7133259 7135010 ECH
Lal6g1001 6 7133259 7135010 Lal6g1001 6 7133259 7135010 PCT