Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0956 ATGTCTGACTCCAAACCTTATGTTGATCTTCCCATTTTGGATATTTCTCAACCATTTCAGCCATCTTCTCTATCCCTTCTCTCTAAAGCCTGCAAAAAGTGGGGATTTTTTCACATAATAAACCATGGAATCTCCAAAGATCTTTGCAGCAAGCTTTATTCACTGTCCAAAGACATCTTCAACCTCCCTTCTGATACTAAACTAAAACTTGGCCCTCTATCCTCTATAAAATCATATACCCCTCACTTCATTGCTTCTCCATTCTTTGAAAGCCTTAGAGTTGATGGACCAAACTTCTATGTTTCTGCTAAGTCTTCTGAAGATATCCTCTTTGACAAACAGAATTCTAAATTCAGTGAGACACTTCAAGAGTATTGTAGCAAGATGGCTGATCTATCTGAAAAAATCATACAACTTCTCTTGATGAGTTTAGGGGATGGCTTTGGAAAGTTGTTTTATGATTCTGAATTCAACAAGTGCCATGGTTACTTGAGAATAAATAGCTACTCAGCTCCAAAGGAAAGTTTGGAAAACCAAGTTGAAGGGCTTGGAATGCATACTGATATGAGCTGCATAACTGTCTTATACCAAGATGAAATTGGAGGGCTTCAAGTAAGGTCACATGATGGAAAATGGATAGATATAAACCCTTCAGAGGGTACCCTAGTGGTAAATATAGGTGATATGCTTCAAGCTTGGAGCAATGATAAGTTAAGGTCCTCAGAACATAGAGTTATTTTGAAGCAGCCTGTGAATAGATTTTCTCTAGCATTCTTTTGGTGCTTTGAGGATGAGAAAGTGATATTGGCACCAAATGAAGTTGTTGGTGAAGAAAACAAGAGGGTGTATGATTCATTTGTGTGCTTGGACTATTTGAAATTCAGGGAGAATAATCAAATAGGGAAGTTTGAAAAGGTGGGTTTTACAGTAAGAGATTTTGCTGGGACCAAGTCTTAA 957 0.3772 MSDSKPYVDLPILDISQPFQPSSLSLLSKACKKWGFFHIINHGISKDLCSKLYSLSKDIFNLPSDTKLKLGPLSSIKSYTPHFIASPFFESLRVDGPNFYVSAKSSEDILFDKQNSKFSETLQEYCSKMADLSEKIIQLLLMSLGDGFGKLFYDSEFNKCHGYLRINSYSAPKESLENQVEGLGMHTDMSCITVLYQDEIGGLQVRSHDGKWIDINPSEGTLVVNIGDMLQAWSNDKLRSSEHRVILKQPVNRFSLAFFWCFEDEKVILAPNEVVGEENKRVYDSFVCLDYLKFRENNQIGKFEKVGFTVRDFAGTKS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0956 318 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 2 312 - -
Lal6g0956 318 Gene3D - 1 294 IPR027443 -
Lal6g0956 318 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 312 - -
Lal6g0956 318 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 78 IPR026992 -
Lal6g0956 318 SUPERFAMILY Clavaminate synthase-like 6 299 - -
Lal6g0956 318 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 263 IPR005123 -
Lal6g0956 318 Pfam 2OG-Fe(II) oxygenase superfamily 177 259 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0956 Lal-Chr6 6657100 6658912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0956 6 291 Glycosyltransferase AT5G59530 29.139 1.19e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0956 - - gmx:100782766 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0956 6 6657100 6658912 Lal6g0956 6 6657100 6658912 PCT