Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0936 ATGAAAAAAACTACACAATCCACACATGTTTTTCTTGTTCTTTCCATCATTGCAATTTTTGCATCACATTCCAAAGCTTACCCTCTCTCAACACACAAAAAATATATCATAGATGATTCAACAGGGCAACGTGCAAAACTTGTATGTGGCAATTGGGCTGGTCACTTAACACCAATGATGCCAGAGGGTCTTGACAAAAGACCCTTAAAGGACATTGTTGGTGAACTAGTTAAGTACAAATTCAACTGTGTTCGTTTAACTTATGCAATTCACATGTGGACAAGGTATAGCAATAACACTGTGAGTGATACCTTAGCCACTTTTAATGTCTCTAAGGTTGTTGAAGGCATATCTAAGAATAACCCTTGGGTGTTGAATGTGACACATATTAATGTGTTTGAGACAGTGGTTAATGAGCTTGGTGCTCAGAATGTGCATGTGTTGCTTGATAACCATGTTAGTAAACCTGAGTGGTGTTGCAGTAATGATGATGGGAATGGTTTCTTTAATGACAAATACTTTGATCCTCAAGAATGGATCCAAGGACTCACTTTGGCAGCCAAACACTTTGCTTCAAATTCTGCTGTATACGATAATACAAAAAACTTTGCTGTGATTGCTTTTGATTCACAACAGGTTGTAGCACAGAGCTTGAGGAATGAATTACGTGGTCCACGCCAAAATGAGAATGATTGGTACAATTACATGAGCCAAGCAGCAGTAGAAATTCACAAGCAAAATCCAAATATTCTAGTAGTTATCTCAGGATTTAATTATGACCTAGACCTTCAGTTTCTGAAGAAAAGACCATTGGAGATAGATTTGGGTAATAAAACAGTATTTGAGGCACATTTGTACTCATGGTCTGGATCACCAAAAGACACATGGCTTAAGCAACCATTGAATATGATATGTTCCAATACTATTAAAGGGATAGTTAACAGAGCAGGGTTCCTTACTGCTGGTAACAATCCAGTTCCTTTAATCTTTTCCGAGTTCGGGTTTGATCAGACCGGAGGTAATGTTGCAGACAACAGATTCTTGACATGCCTCCAAACCTACCTTGTTAGTACAGACATGGATTGGGCTATTTGGTCCTTCCATGGCACCTACTATATAAGAGGAGACCAAGTTCAATTTGAAGAGTTATTTGGTGTAATGAACTCTGATTGGAATAATCTTAGAAATCCAAACTTCACTGACAAGTTTCAGCTTTTGCAAAGGAAGAACCAAGATCCTACTTCCAAAGGCACTGATGCATATATCATATACCATCCACTAACTGGAAAATGTGGCCAAGTGAATGAAAAAAATGAACTTGAACTTGGTAGCTGTGAAGGCCAAAACAGATGGAGTTATAATGGATCTCTTATCCTTATCAATAGCACTCAGAAATGCTTAACTGATTCTGGTGAAGGACTTCCAGTAACTGTATCTGATAATTGCCAAAGCCAAAGCAGTTCTTGGAAACCTATATCACTTTCTAGCCTTCATTTGGCTACCACTAACAAAAATGGGAACCAACTTTGCTTGCATAACAATTCCAACTCATCAAGCATTGTTTCTTCTCAATGTATCTGTGTAAAGGATGATCCTCTATGTCTAGATGACCCTCAAAGTCAGTGGTTTCAGCTTGTTCCCACCAATGTGTAG 1653 0.3835 MKKTTQSTHVFLVLSIIAIFASHSKAYPLSTHKKYIIDDSTGQRAKLVCGNWAGHLTPMMPEGLDKRPLKDIVGELVKYKFNCVRLTYAIHMWTRYSNNTVSDTLATFNVSKVVEGISKNNPWVLNVTHINVFETVVNELGAQNVHVLLDNHVSKPEWCCSNDDGNGFFNDKYFDPQEWIQGLTLAAKHFASNSAVYDNTKNFAVIAFDSQQVVAQSLRNELRGPRQNENDWYNYMSQAAVEIHKQNPNILVVISGFNYDLDLQFLKKRPLEIDLGNKTVFEAHLYSWSGSPKDTWLKQPLNMICSNTIKGIVNRAGFLTAGNNPVPLIFSEFGFDQTGGNVADNRFLTCLQTYLVSTDMDWAIWSFHGTYYIRGDQVQFEELFGVMNSDWNNLRNPNFTDKFQLLQRKNQDPTSKGTDAYIIYHPLTGKCGQVNEKNELELGSCEGQNRWSYNGSLILINSTQKCLTDSGEGLPVTVSDNCQSQSSSWKPISLSSLHLATTNKNGNQLCLHNNSNSSSIVSSQCICVKDDPLCLDDPQSQWFQLVPTNV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0936 550 SUPERFAMILY Ricin B-like lectins 418 525 IPR035992 -
Lal6g0936 550 Pfam Cellulase (glycosyl hydrolase family 5) 51 367 IPR001547 GO:0004553|GO:0071704
Lal6g0936 550 SUPERFAMILY (Trans)glycosidases 29 397 IPR017853 -
Lal6g0936 550 Gene3D Glycosidases 26 409 - -
Lal6g0936 550 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS HYDROLASE 6 550 - -
Lal6g0936 550 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 6 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0936 Lal-Chr6 6521550 6523857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0936 26 546 Glycoside Hydrolase AT1G13130 39.394 3.37e-137 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0936 K01179 - gmx:100811735 555.829