LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal6g0928	ATGACTATTTGTTCATTGTGTTCATCTTCATTCCCTTCAATTTCAAGACCTTCTTATCAACCGCAATTTATACCTTTCAACCTTCCTCATCGAACCGCTACATCCCGGTTCAAATGTTCAGCCGGTCAGACCGGGTTCTTCACCAAACTGGGCCGGTTGTTAAAGGAAAAGGCGAAGAGCGACGTCGACAAAATCTTCTCCGGTTTCTCCAAAACCCGAAACAATCTCGCCGTAATCGATGAGCTTCTCCTTTATTGGAACCTCTCTGACACTGACAGAGTCCTCGATCAACTCGAAGAGGCTCTTTTAGTGTCTGATTTTGGGCCAAGAATCACTATTAAGATAGTTGATAACTTGAGGGAGGATATATTATCAGGGAAGCTTAAATCAGGGAATGAGATTAAGGAAGCATTGAAGCGGAATGTTTTGGAGTTACTAACCAGCAAGGGGAGTAAAACTGAACTTCAACTTGGATTCAGGAAACCAGCTGTAATAATGATAGTTGGTGTTAATGGTGGTGGGAAAACAACATCTCTGGGAAAGCTGGCCTATAGATTGAAGTATGGAGGAGCTAAGATATTGATGGCAGCTGGTGATACATTTCGAGCAGCTGCCAGTGATCAGCTGGAAATATGGGCTGAACGGACTGGGTGTGAGATTGTTGTGGCTGAATCTGAGAAAGCAAAAGCATCATCAGTGCTTGTACAGGCTGTAAAAAAGGGAAAAGAGCTAGGATTTGATATTGTTTTGTGTGATACATCTGGACGTTTACACACTAATTACAGTCTAATGGAAGAGTTAATTTCTTGTAAAAAAGCTGTTGGGAAAGTAGTTTCTGGTGCACCTAATGAGATCCTCCTGGTTCTGGATGGGACTACTGGTTTGAATATGTTGCCACAAGCAAGAGAATTCAACGAAGTAGTTGGTGTTACTGGTTTAATTTTGACAAAGCTGGACGGTTCTGCTAGAGGTGGCTGTGTGGTCAGTGTGGTTGATGAGCTTGGAATCCCTGTAAAATTTGTGGGTGTTGGTGAAGGTGTTGAAGACCTTCAACCCTTTGATGCAGAAGCCTTTGTGAATGCCATTTTTGCCTAA	1095	0.4274	MTICSLCSSSFPSISRPSYQPQFIPFNLPHRTATSRFKCSAGQTGFFTKLGRLLKEKAKSDVDKIFSGFSKTRNNLAVIDELLLYWNLSDTDRVLDQLEEALLVSDFGPRITIKIVDNLREDILSGKLKSGNEIKEALKRNVLELLTSKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRLKYGGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAESEKAKASSVLVQAVKKGKELGFDIVLCDTSGRLHTNYSLMEELISCKKAVGKVVSGAPNEILLVLDGTTGLNMLPQAREFNEVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFA	364

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal6g0928	364	ProSitePatterns	SRP54-type proteins GTP-binding domain signature.	337	350	IPR000897	GO:0005525\|GO:0006614
	Lal6g0928	364	PANTHER	SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA	14	364	-	-
	Lal6g0928	364	SMART	SRP54_3	162	364	IPR000897	GO:0005525\|GO:0006614
	Lal6g0928	364	Gene3D	-	52	153	IPR042101	-
	Lal6g0928	364	SMART	AAA_5	161	334	IPR003593	-
	Lal6g0928	364	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	159	363	IPR027417	-
	Lal6g0928	364	Pfam	SRP54-type protein, helical bundle domain	91	140	IPR013822	GO:0005525\|GO:0006614
	Lal6g0928	364	TIGRFAM	ftsY: signal recognition particle-docking protein FtsY	91	363	IPR004390	GO:0006614
	Lal6g0928	364	PANTHER	BNAA04G26420D PROTEIN	14	364	-	-
	Lal6g0928	364	SMART	SRP54_N_2	65	146	IPR013822	GO:0005525\|GO:0006614
	Lal6g0928	364	CDD	FtsY	163	362	-	-
	Lal6g0928	364	Pfam	SRP54-type protein, GTPase domain	162	363	IPR000897	GO:0005525\|GO:0006614
	Lal6g0928	364	Gene3D	-	154	364	IPR027417	-
	Lal6g0928	364	SUPERFAMILY	Domain of the SRP/SRP receptor G-proteins	62	139	IPR036225	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal6g0928	Lal-Chr6	6455327	6462304	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal6g0928	K03110		-	gmx:100791073	620.542

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal6g0928	6	6455327	6462304	Lal6g0928	6	6455327	6462304	ECH