Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0919 ATGGAAGGCGACGACGAAACCTCGGGTTCGATGATCGACGAAATCTACGCCAACGGCGACGGCGGCGACAACAACCGCACCCGGAAACCTATTTTCAGCGGCGACCAACTCGACATCGAGGTCTACGCGAGCCTCTACACCGGGCGAACCAAGATCATGCGGCTATTGTTCCTCGCTGATCGCTGCGCCGAGAAGAACAACACGACGATGCAACTCGACGCGCTTCGGATAGCGCATGATGAGATTAAGAAGGGAGAGAATACGCAGTTGTTTAGGGAAGTGGTTCAGAAGATTGATGGAAGGTTGGGACCTGATTATGATATGGATGTGGCTTGGGCTGAGAACGTGGATCGTAGGGCTGAGCAGAAGAAGGAGAAGCTTGAGAATGAGCTTAATGCTTATAGGACAAATTTGATTAAAGAAAGCATAAGAATGGGATACAATGATTTTGGGGACTTTTACTATTCTCATGGTCAATTGGGGGATGCTTTTAAAAGTTATGCACGGACCCGGGATTATTGCACCACATCAAAGCACATTATTCATATGTGTATGAGTGCAATTCTGGTCAGCATTGAGATGGGTCAATTTACTCATGTCACAAGCTATGTTGGCAAGGCTGAACAAGCACCAGAGTCCCTTGACCTGATAACAGTTGCAAAGCTACGTTGTGCTGCAGGATTGGCAAATCTAGAGGCCAAAAAGTACAAGCTTGCTGCCCGAAAGTTTCTTGAAATTGGCTCAGAACTGGGAAGTCACTATAATGAAGTAATTGCATCTCAAGATGTAGCAACCTATGGAGGACTTTGTGCACTTGCAACATTTGATCGATCAGAGTTAAAGGCAAGTATTCAGTTATATTGTTATGATGATTCTTCTTCTCAAGGACCATTATGGGACATTGATTACAAAGTTATAGACAATATCAACTTCCGGAATTTCTTAGAGTTGGTACCCGAAGTAAGGGAACTGGTAAATGATTTTTATTCAAGCCACTATGCTTCATGTCTGGAATACCTTGGGAACCTCAAAGCCAATCTATTGCTTGACATACATTTGCATGACCATGTTGAGACACTTTATGATCAAATTCGTCATAAAGCCCTTATCCAGTATACACACCCATTTGTGTCCGTTGATTTGAACATGATGGCAAATGCATTCAAGACATCTGTTACTGGACTTGAGAAAGAACTTGAAGCTTTGATTACTGATAATCAGATACAGGCTCGAATAGATTCACACAACAAAATTTTGTACGCACGGCATGCAGATCAAAGGAATGCCACTTTTCAAAGGGTTCTGGAAACTGGAAGAGTATTTGATCGTAATGTTCGTGACATGTTGCTGAGATCTAATCTTATCAAGCATGAACACAATCTTCGGGCATCAAGGAAGCTTTGA 1404 0.4316 MEGDDETSGSMIDEIYANGDGGDNNRTRKPIFSGDQLDIEVYASLYTGRTKIMRLLFLADRCAEKNNTTMQLDALRIAHDEIKKGENTQLFREVVQKIDGRLGPDYDMDVAWAENVDRRAEQKKEKLENELNAYRTNLIKESIRMGYNDFGDFYYSHGQLGDAFKSYARTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVGKAEQAPESLDLITVAKLRCAAGLANLEAKKYKLAARKFLEIGSELGSHYNEVIASQDVATYGGLCALATFDRSELKASIQLYCYDDSSSQGPLWDIDYKVIDNINFRNFLELVPEVRELVNDFYSSHYASCLEYLGNLKANLLLDIHLHDHVETLYDQIRHKALIQYTHPFVSVDLNMMANAFKTSVTGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLETGRVFDRNVRDMLLRSNLIKHEHNLRASRKL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0919 467 Coils Coil 110 144 - -
Lal6g0919 467 MobiDBLite consensus disorder prediction 1 30 - -
Lal6g0919 467 PANTHER 26S PROTESOME SUBUNIT 6 1 462 IPR019585 -
Lal6g0919 467 Gene3D - 35 405 - -
Lal6g0919 467 ProSiteProfiles PCI domain profile. 235 426 IPR000717 -
Lal6g0919 467 Pfam PCI domain 320 421 IPR000717 -
Lal6g0919 467 Pfam 26S proteasome subunit RPN7 109 282 IPR045135 -
Lal6g0919 467 SUPERFAMILY "Winged helix" DNA-binding domain 350 430 IPR036390 -
Lal6g0919 467 SMART PINT_4 355 438 IPR000717 -
Lal6g0919 467 PANTHER BNAA09G38820D PROTEIN 1 462 - -
Lal6g0919 467 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 355 438 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0919 K12175 - gmx:100812958 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0919 6 6376402 6380986 Lal6g0919 6 6376402 6380986 ECH