Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0918 ATGGCCACGCCGTCGCCGGACGCCGTCGCCACTTTCATGCGAATCACCGGATCAACCGAGTTCGTCGCCGTCCAGAAACTAGAGGAATATGGAGGCAATCTCAATGAAGCTGTTAATGCATATTTTGTTGAAGGGGATAGGCACATGCAGAGGCAAAATCTTGTTGCTGCCCCACAATATGAGTACTCTGATGTGAATAATCAAAACCGTGCTGGATCACGTGGAATTTTACCTTTTCTCTCCGCTGCTAGAAGATTTAGACCTTCCCTACTACTTGACCCAAATTATAGGAGAGAACTTAGGGATACGGTTAATGGGATCAGTTCCCCTGCACCTACCAATCATGCCCTGCATACTTCCTATCCAGGAGAGTCAAGGGAAGTTCCTTCGGGGTTCAATAATGCTTTTGAGCTGTCTCATTATCAATCAGGATTGGGCTCTACAAATGCTAACAGGGCTGGAAATTTAATATCAGATGGTCGAGGAGTTTATGGCAGAGACAATTACCAGAATGACTACAATTTAGATCGGTCAAGTACCTCACATGTTCTTGATAATGAGATAGAGGAAGCAATGATTCAAGCAGCAATTGAGGCTTCAAAGAAAGAGCGCGGAGAAGGTTCTTCATGGAAGCAATTTGGTGCTCTTAATATTTCATCTGATGGTGGGCTTCGTCAAAATAATATTCAACAAGAAGATGATGATTTAGCTCATGCACTTTCATTGTCCAAAAAGATGGCAGAGCAGGAGGAAGCAATACGTGAGCAACAGAAAAATAAAGGTCTTGGTGGACATGAATTATTAACCAAGGGAGAGAATACCAACAGTAGCAAAAGCATATCGGAGTGGGAAGGTATTTCTTACGATGAGCTTAGTGAAGCAGTGTTGATTGAGAGTGCACTTTTTGGTGAAATTCCCACTCATAGTTCAAAGAAAATTTCATCTTTGCCTGATCCACCACACCATCCAGAAAAATCAGTGGATCCTAAGATTCAGTGTTTGTCCAGTACAGCATCACAATTATCAACAGACACTCGGTTGCTGAGACAACAACAGGATGCTGAATATCTAGAATCACTATTTGCTGATAAACAAAAGGAATTGAACTCTCTCAAGGAAGCTGAAACCCATAGCCTGAAGGAAGAGGAATCACACAAAAAGATGCTTGAAAGAAAGGAATTGGATAAAATGCTTGCTAAGAAAAAAGTTAAGCTTTCAAATGAACCTCCGCCAGATGATATAAATGCAATCACCATCGTTGTTCGAATGCCAGATGGCAGTCGCAGGGAGCGCCGCTTTCTCAAAACTGACAAACTTCAGCTTCTTTTTGATTTCATAGACATTTCTGAAGCAGTGAAGCCTGGCACCTACAAAGTGGTAAAGTCATACCCGAGACGTGCTTACGGCACTAATGATAGTTCGTCAACCTTGAATGAAGTAGGCATTAGCAGCAAGAACGAGGCTCTGTTTCTGGAGTTGATTTAG 1485 0.4249 MATPSPDAVATFMRITGSTEFVAVQKLEEYGGNLNEAVNAYFVEGDRHMQRQNLVAAPQYEYSDVNNQNRAGSRGILPFLSAARRFRPSLLLDPNYRRELRDTVNGISSPAPTNHALHTSYPGESREVPSGFNNAFELSHYQSGLGSTNANRAGNLISDGRGVYGRDNYQNDYNLDRSSTSHVLDNEIEEAMIQAAIEASKKERGEGSSWKQFGALNISSDGGLRQNNIQQEDDDLAHALSLSKKMAEQEEAIREQQKNKGLGGHELLTKGENTNSSKSISEWEGISYDELSEAVLIESALFGEIPTHSSKKISSLPDPPHHPEKSVDPKIQCLSSTASQLSTDTRLLRQQQDAEYLESLFADKQKELNSLKEAETHSLKEEESHKKMLERKELDKMLAKKKVKLSNEPPPDDINAITIVVRMPDGSRRERRFLKTDKLQLLFDFIDISEAVKPGTYKVVKSYPRRAYGTNDSSSTLNEVGISSKNEALFLELI 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0918 494 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 9 ISOFORM X1 1 256 - -
Lal6g0918 494 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 9 ISOFORM X1 277 494 - -
Lal6g0918 494 Pfam UBX domain 414 492 IPR001012 GO:0005515
Lal6g0918 494 ProSiteProfiles UBX domain profile. 412 490 IPR001012 GO:0005515
Lal6g0918 494 Coils Coil 239 259 - -
Lal6g0918 494 Gene3D - 1 45 - -
Lal6g0918 494 SUPERFAMILY Ubiquitin-like 378 487 IPR029071 -
Lal6g0918 494 Pfam UBA-like domain 7 46 - -
Lal6g0918 494 SMART uim 188 207 IPR003903 -
Lal6g0918 494 SMART uim 231 250 IPR003903 -
Lal6g0918 494 Coils Coil 354 374 - -
Lal6g0918 494 CDD UBX 418 492 - -
Lal6g0918 494 SUPERFAMILY UBA-like 5 42 IPR009060 GO:0005515
Lal6g0918 494 SMART ubx_3 409 493 IPR001012 GO:0005515
Lal6g0918 494 MobiDBLite consensus disorder prediction 253 280 - -
Lal6g0918 494 PANTHER FAS-ASSOCIATED PROTEIN 1 256 - -
Lal6g0918 494 PANTHER FAS-ASSOCIATED PROTEIN 277 494 - -
Lal6g0918 494 CDD UBA_Ubx1_like 6 42 - -
Lal6g0918 494 Gene3D - 414 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0918 Lal-Chr6 6366554 6373648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0918 - K18726 gmx:100795740 583.178