Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0909 ATGGCAGATCAAGGAGAATTACCAGAGGGAACGTTGGAGAACATTCTAGAACAAGAGTCTCTGAAGTGGGTCTTTGTTGGAGGCAAAGGTGGTGTTGGCAAAACCACTTGCAGTTCCATTCTCTCTATTCTTCTCGCCACTGTTCGAAGCTCTGTTCTAATAATCTCCACAGACCCTGCTCATAATCTTAGCGATGCTTTTCAACAACGCTTCACAAAGACCCCCACTTTGGTCAATGGTTTCTCCAATCTCTATGCCATGGAGGTGGATCCAACAGTTGAACACGATGAGATGACTGATGGGATGGATAGTTTGTTCTCTGAGCTGGCTGGTGCAATTCCTGGAATCGACGAGGCCATGAGTTTTGCGGAGATGTTGAAATTGGTGCAGACAATGGATTATTCTGTTATAGTATTTGATACTGCTCCCACTGGTCATACACTCAGACTATTGCAATTCCCATCAGTTCTAGAAAAGGGTCTTGCAAAAATTATGTCTTTGAAAAGTAAATTTGGTGGTTTATTTAATCAGATGACTCGCATGTTTGGCATGGGCGATGATTTTGGTGATGATGCAATTGTTGGGAGGCTTGAAGGCATGAAGGAAGTGATCGAGCAAGTTAATAAGCAATTTAAGGATCCGGACATGACAACTTTTGTCTGTGTTTGCATTCCGGAATTTCTTTCACTTTATGAAACTGAGAGATTGGTTCAGGAACTTACAAAGTTTGAGATAGATACACACAATATCATCATTAATCAAGTACTCTTCGATGACGAAGATGTTGAATCCAAGTTACTTAAAGCAAGGATGAAAATGCAACAGAAGTATCTGGACCAGTTTTACATGTTGTATGATGATTTTCACATTACCAAGCTGCCATTGCTACCAGAAGAGGTAACTGGGGTTGATGCACTGAAAGCATTCTCAAGACATTTTAAAACACCATATCAACCCTTGTGTAGTAGAGACAAAGTAGAAAGGTTAGAGAATAGAGTATCAGCAATAAAGCACCAGTTAAAAGAGGCTGAAGAAGAATTGAAGAAACTCAAGGCTTGA 1059 0.406 MADQGELPEGTLENILEQESLKWVFVGGKGGVGKTTCSSILSILLATVRSSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPTVEHDEMTDGMDSLFSELAGAIPGIDEAMSFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPSVLEKGLAKIMSLKSKFGGLFNQMTRMFGMGDDFGDDAIVGRLEGMKEVIEQVNKQFKDPDMTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVLFDDEDVESKLLKARMKMQQKYLDQFYMLYDDFHITKLPLLPEEVTGVDALKAFSRHFKTPYQPLCSRDKVERLENRVSAIKHQLKEAEEELKKLKA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0909 352 Coils Coil 326 352 - -
Lal6g0909 352 Hamap ATPase <gene_name> [GET3]. 8 321 IPR027542 GO:0005524|GO:0016887
Lal6g0909 352 PANTHER ATPASE LOC107826790 5 351 - -
Lal6g0909 352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 309 IPR027417 -
Lal6g0909 352 Pfam Anion-transporting ATPase 22 312 IPR025723 -
Lal6g0909 352 CDD ArsA 37 310 - -
Lal6g0909 352 TIGRFAM GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 25 311 IPR016300 GO:0005524|GO:0016887
Lal6g0909 352 Gene3D - 1 332 IPR027417 -
Lal6g0909 352 PANTHER ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE 5 351 IPR016300 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0909 Lal-Chr6 6294223 6300700 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0909 K01551 - gmx:100816517 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0909 6 6294223 6300700 Lal6g0909 6 6294223 6300700 ECH
Lal6g0909 6 6294223 6300700 Lal22g0806 22 5965494 5972977 LSH