Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0899 ATGGCGCTGAAGCGAGGGATTTCGTCCTGGAAGAATAGAAGCAAAGGATTTCATTTCTCCGTTCTGATTTTCGTTCTCCTATGTGTTCTTGCGCCTGTGGTTTTATTCTTCGGCTGGGGGCTCTATGCTGCTGCGGGGTTTCTCAGGCCTCATTTTATTATCAAAGTGATATTTCAGCTGTTCCAAATAAACAGGTTGCCAAATGGAGAGAATGGCAGACATTGCAGGACCTTAAATCACTTTTTTCAAAAGAGGCAAGCTCATACTTATAATAATTTGCTATTGGTTCTTGATGTTATTGTATCTATCACAAATGATATGGGGCCTTTAAGTCTTGACAATTTCAGAAAAAATAATTTGTCTGCCTCATGGAGAGTTGCTGGATCAGAAATTTCAAATGCTACATATGAGCTAAACCAATCAACAATGCATGCTAGAAAGGAAAAAACAAAGGCGAAAAAAGGCAAATCTTCAGGTGATATCCGTGCTCAGTGGACTGATAGTCCTACACAGCAAATCCGAAGGCAATTAATAGAGAAAAGGCGAAAAAAGCGTGCTGCCGAGTTAGTAAAACTGAATGATGAAGTGATTGTTGAACTTGAAAATGCAGCTATCGAACGCTCAAGATCAGTAGAGTCAGCAGTTTTGGGTAAATACAGCATTTGGAGGAAAGAAAATGAAAATGAAAAAGCTGATTATACAGTTCGGTTGATCCGGGACCAGATCATTATGGCTAGGGTATACTTGAGTATTGCGAAGATGAAGAACAAGCTTGAACTGTACCGAGAATTGCAATCTCGGCTAAAAGAGAGTCAACGTGCTTTGGGTGATACAAATTCTGATTCAGATCTACATCACAGTGCACATGAAAAAATGAAGGCTATGGGCCAAGTTCTGTCAAAAGCAAGAGGGCAATTATATGACTGCAAGTTGGTCACTGGAAAGCTGAGGGCAATGCTACAAACAGCTGATGAGCAGGTTAGGAGGATGAAGAAGCAGAGCACATTCCTCAGTCAGTTGGCTGCGAAGACGATACCAAATGGAATTCATTGCTTATCCATGCGCCTTACCATAGATTACAATCTCCTTCTTCTTGAAAAGAGAAAGTTCCCTAGGAGTGAGAACTTGGAGAATCCCAGTCTTTATCATTATGCATTGTTTTCAGACAATGTCTTGGCTGCATCTGTGGTTGTCAACTCGACTATTATGAACGCAAAGGACCCTTCGAAGCATGTTTTTCACGTAGTTACTGATAAACTAAATTTTGGAGCCATGAACATGTGGTTTCTGTTGAACCCTCCTGGGAAAGCTACAATCCATGTTGAAAATGTTGATGAATTCAAGTGGTTGAACTCATCCTACTGCCCGGTCTTACGGCAGCTGGAATCTGCAACAATGAAAGAATATTATTTCAAGGCAGAAAATCCAAACTCACTTTCATCTGGTGCTTCAAATCTGAAGTATAGAAACCCAAAATATCTCTCAATGCTCAACCATCTGAGATTCTATCTTCCACAAGTTTATCCAAAATTGGATAAAATCCTTTTTCTTGATGATGACATTGTTGTTCAGAAGGATTTGACTGGATTGTGGGCTGTGAATCTTAATGGGAAAGTAAATGGTGCAGTTGAAACTTGTGGTGAGAGCTTTCACCGATTTGACAAATACCTTAACTTTTCAAATCCACATATTGCAAGAAATTTTGATCCAAATGCTTGTGGTTGGGCATACGGGATGAACATATTTGATTTGAAGGAGTGGAAAAAGAAGGATATCACTGGCATATATCACAAGTGGCAGAATATGAATGAAGACAGGGTGCTGTGGAAGCTGGGAACATTACCTCCAGGGCTGATAACATTCTATGGGCTGACACATCCGTTAAATAAATTATGGCATGTACTTGGTTTGGGTTATAATCCAAGTGTTGATCGATCAGTGATCGAGAATGCTGCAGTTGTACACTACAATGGAAATATGAAGCCATGGTTAGAGATTGCCATGACAAAGTATCGGTCTTACTGGACCAAATATGTCAAATATGAAGATCCATATCTTCGGAACTGTAAGCTAAAGGAATAG 2082 0.3996 MALKRGISSWKNRSKGFHFSVLIFVLLCVLAPVVLFFGWGLYAAAGFLRPHFIIKVIFQLFQINRLPNGENGRHCRTLNHFFQKRQAHTYNNLLLVLDVIVSITNDMGPLSLDNFRKNNLSASWRVAGSEISNATYELNQSTMHARKEKTKAKKGKSSGDIRAQWTDSPTQQIRRQLIEKRRKKRAAELVKLNDEVIVELENAAIERSRSVESAVLGKYSIWRKENENEKADYTVRLIRDQIIMARVYLSIAKMKNKLELYRELQSRLKESQRALGDTNSDSDLHHSAHEKMKAMGQVLSKARGQLYDCKLVTGKLRAMLQTADEQVRRMKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYNLLLLEKRKFPRSENLENPSLYHYALFSDNVLAASVVVNSTIMNAKDPSKHVFHVVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAENPNSLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVNLNGKVNGAVETCGESFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLITFYGLTHPLNKLWHVLGLGYNPSVDRSVIENAAVVHYNGNMKPWLEIAMTKYRSYWTKYVKYEDPYLRNCKLKE 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0899 693 SUPERFAMILY Nucleotide-diphospho-sugar transferases 382 690 IPR029044 -
Lal6g0899 693 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 384 688 IPR029044 -
Lal6g0899 693 Coils Coil 251 281 - -
Lal6g0899 693 Pfam Glycosyl transferase family 8 351 667 IPR002495 GO:0016757
Lal6g0899 693 PANTHER HEXOSYLTRANSFERASE 13 693 - -
Lal6g0899 693 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 13 693 IPR029993 GO:0047262
Lal6g0899 693 CDD GT8_like_1 382 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0899 Lal-Chr6 6185109 6192215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0899 1 693 Glycosyltransferase AT3G61130 71.306 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0899 K13648 - gmx:100813219 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0899 6 6185109 6192215 Lal6g0899 6 6185109 6192215 ECH
Lal9g1372 9 15399112 15406485 Lal6g0899 6 6185109 6192215 LSH
Lal9g1372 9 15399112 15406485 Lal6g0899 6 6185109 6192215 PCT
Lal6g0899 6 6185109 6192215 Lal6g0899 6 6185109 6192215 PCT
Lal6g0899 6 6185109 6192215 Lal9g1372 9 15399112 15406485 PCT