Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0878 ATGGGTGCTAACATATCGAACATGGAGTGCTATCCATATGCATCAGCACAATCATCTCACATTATCACTTTCCATTCAACTGCTAAATGGAAGGTTCACTTTGATGCCTCCAAAGGGATGAACAAGCTTATGGTGATTGATTTCACTGCTACCTGGTGTGGACCTTGCAAATACATGGACCATGTTATCCAAGACTTTGCTGCAAAATATACACAAGTTGAGTTCATCAAGATTGATGTGGATGAGTTAATGGCAATGGCAGCATTCATATTGATGAAAAAAGGAAAAGTTATTGATAAGTTGGTGGGAGCAAAAACTGAGGAGCTAGAAACATTGATTCAGAACCATCTAAACTAA 357 0.3866 MGANISNMECYPYASAQSSHIITFHSTAKWKVHFDASKGMNKLMVIDFTATWCGPCKYMDHVIQDFAAKYTQVEFIKIDVDELMAMAAFILMKKGKVIDKLVGAKTEELETLIQNHLN 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0878 118 Pfam Thioredoxin 40 114 IPR013766 -
Lal6g0878 118 ProSitePatterns Thioredoxin family active site. 45 63 IPR017937 -
Lal6g0878 118 SUPERFAMILY Thioredoxin-like 17 117 IPR036249 -
Lal6g0878 118 Gene3D Glutaredoxin 6 118 - -
Lal6g0878 118 CDD TRX_family 33 114 - -
Lal6g0878 118 PANTHER THIOREDOXIN 1 117 - -
Lal6g0878 118 PANTHER THIOREDOXIN 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0878 Lal-Chr6 6040494 6041671 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0878 K03671 - gmx:100820138 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0878 6 6040494 6041671 Lal6g0878 6 6040494 6041671 ECH