Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0876 ATGGATTCCTCATCTTCTACGCCATCGTCTCTTCACCTTGCCATGGCTGCTTTATTTGGAGCCTCTTTCATGGCCTTATCTGCGTTCTACATCCACCGCCGCACCGTTGATCAGGTCCTCCACCGCCTCATCGATATACGCCGCCGACGCATTAACCGCCAACACGACAATCAATCTTCCCTCAACGACGATGACGACGACTATGGAGATAGGTTAGGGTTTCATCGTGACGGCGGAGAAACGGTTACCGATCTCAGAATGTGTCCAGGAAGCTTGGATGATAATGCGTTTATTCGAAACTCGAGGAGTGCGTCTTCGTTGCCTAATGTTGTTGTCTCTTCTAGAACTGGTTGGTTCGAGGAAGAAGAAGAGGAGAATGAGCCTCGCCACCGTGCTTCGTCGCTGGATAATCTCCATTTTGTTCCGTTAGGGATTCCACCGCTTCCAACAGATGGAGGGAATGCTCATCTTTCATCTTCCTATAAAGGATTAGCATCTCTTGGTAGAACTAACACTCGCAGATCTCCAAGCTGTGACGCATTTGAAAGTGTAGAAGGTTCTGATGAGGAAGGATCACACCTTGAGGATGATAGTTGCATTCCTTATGGACTAAATGCAAGCCATACCAACAATCAGATGTATGGGGAGATTTCGAAATGTCAACAAGACCTTGCGTTTGTCAATACTCTCTTGCCTCCAAGAAACACAACGAATGACCCAACAAACATAGAAGAAGAGGAAGTATGCAAGATGCTTCGTGAATGTTTAAATTTGCGGAAGAAATATGTTTATAAGGAAAATGTTGCCCCATGGAAGGCAGAAACGGTGGTAAAAAACTCCGATCCATTTCACTTTGAACCAGTTGAAGCTACAGCTCACCACTTTAGGTTGGAAGATGGAGTTTTTCATGTTTATGCAAGTAAAAATGAAACTGAAGAGCTCTTCCCTGTTGCAAGCTCAACAACATTTTTTACAGATATGCATTACATTCTCAAAGTTATGTCCATTGGGAATGTTCGCTCTGCATGCCACCATAGGCTACGATTCCTTGAGGAAAAATTCCGTCTTCATCTGTTACTAAATGCAGATAGGGAGTTTCTGGCCCAGAAGAGTGCACCACATCGAGATTTTTACAATATCCGAAAAGTTGATACTCATATTCATCATTCTGCCTGTATGAATCAGAAACATCTTGTCCGCTTTATCCGGTCAAAATTAAGAGAAGAACCTGATGAGGTTGTTATATTTAGAGATGGCAAGTATATGACACTGAAGGAGGTGTTCGAGAGCTTGGATTTGACAGGGTATGATCTGAATGTTGATTTGATGGACGTTCATGCAGATAAGAGCACATTCCATAGATTTGACAAATTCAACCTAAAGTATAATCCTTGTGGACAGAGCAGACTCAGAGAGATATTCTTAAAGCAGGATAATCTTATACAAGGAAGGTTCCTGGCAGAAATAACAAAGCAAGTTTTGTCAGATCTTGAGACAAGCAAATTTCAGATGGCTGAGTACAGGATCTCTGTTTATGGAAGAAAACAGAGTGAATGGGATCAGCTGGCAAGTTGGTTTGTTAACAATGCTCTTTACAGTAGCAGTGCTGTATGGCTAATACAGTTACCACGGCTATACAACGTGTACAAGAATATGGGAACTGTTACCTCCTTTCAGAATATTTTGGATAACGTGTTTATTCCCCTTTTTGAAGTTACAGTAGATCCAAACTCTCATCCTCAATTACATCTGTTCTTGATGCAGGTTGTGGGATTTGATCTTGTAGATGATGAAAGTAAACCAGAAAGACGTCCAACTAAGCACATGCCTACTCCTGCTGAGTGGACTAATGAATTCAATCCAGCTTACTCGTACTACCTTTATTACTGCTATGCAAACTTGTATACACTCAACAAGCTGCGTGAATCTAAAGGAATGACGACAATAAAGTTGCGGCCTCATTGTGGAGAGGCAGGTGATAATGATCATTTGGCTGCTGCTTTCCTCCTGTGCCATAACATTTCCCATGGGATTAAATTACGGAAGACTCCTGTTTTGCAATATTTGTATTACCTTGCACAGATTGGACTATGCATGTCACCTCTTAGCAACAACTTCCTGTTCTTGGACTATCACCGCAATCCAATGCCTATGTTTTTCCAGCGAGGTTTAAATGTATCTCTCTCTTCGGATGATCCATTGCAAATTCATTTGACAAAAGAACCACTACTAGAAGAATATAGTGTTGCAGCAAAGGTATGGAAGCTCTCTGCCTGTGACCTGTGTGAGATAGCAAGAAATTCTGTCTACCAATCTGGATTTTCGCATCAAGCCAAGTTACGCTGGCTTGGGGATAAATATTTCGTGAGAGGTTCTGAAGGAAATAATATTCAAAAGAGCAATGTTCCCAACATTAGGATCTCTTTCCGATATGAGGTGACTTGGAAGGACGAGATGCAATATATTTACGCTGGTGAAGCCACCTTCCCTGAAGATGTAGACCCATGA 2508 0.4215 MDSSSSTPSSLHLAMAALFGASFMALSAFYIHRRTVDQVLHRLIDIRRRRINRQHDNQSSLNDDDDDYGDRLGFHRDGGETVTDLRMCPGSLDDNAFIRNSRSASSLPNVVVSSRTGWFEEEEEENEPRHRASSLDNLHFVPLGIPPLPTDGGNAHLSSSYKGLASLGRTNTRRSPSCDAFESVEGSDEEGSHLEDDSCIPYGLNASHTNNQMYGEISKCQQDLAFVNTLLPPRNTTNDPTNIEEEEVCKMLRECLNLRKKYVYKENVAPWKAETVVKNSDPFHFEPVEATAHHFRLEDGVFHVYASKNETEELFPVASSTTFFTDMHYILKVMSIGNVRSACHHRLRFLEEKFRLHLLLNADREFLAQKSAPHRDFYNIRKVDTHIHHSACMNQKHLVRFIRSKLREEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLMDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEITKQVLSDLETSKFQMAEYRISVYGRKQSEWDQLASWFVNNALYSSSAVWLIQLPRLYNVYKNMGTVTSFQNILDNVFIPLFEVTVDPNSHPQLHLFLMQVVGFDLVDDESKPERRPTKHMPTPAEWTNEFNPAYSYYLYYCYANLYTLNKLRESKGMTTIKLRPHCGEAGDNDHLAAAFLLCHNISHGIKLRKTPVLQYLYYLAQIGLCMSPLSNNFLFLDYHRNPMPMFFQRGLNVSLSSDDPLQIHLTKEPLLEEYSVAAKVWKLSACDLCEIARNSVYQSGFSHQAKLRWLGDKYFVRGSEGNNIQKSNVPNIRISFRYEVTWKDEMQYIYAGEATFPEDVDP 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0876 835 Pfam AMP deaminase 245 822 IPR006329 GO:0003876|GO:0032264
Lal6g0876 835 PANTHER AMP DEAMINASE 238 834 IPR006329 GO:0003876|GO:0032264
Lal6g0876 835 PANTHER AMP DEAMINASE 10 199 IPR006329 GO:0003876|GO:0032264
Lal6g0876 835 ProSitePatterns Adenosine and AMP deaminase signature. 727 733 IPR006650 GO:0009168|GO:0019239
Lal6g0876 835 Gene3D - 393 483 - -
Lal6g0876 835 TIGRFAM AMP_deaminase: AMP deaminase 286 820 IPR006329 GO:0003876|GO:0032264
Lal6g0876 835 CDD AMPD 323 819 IPR006329 GO:0003876|GO:0032264
Lal6g0876 835 MobiDBLite consensus disorder prediction 168 194 - -
Lal6g0876 835 PANTHER AMP DEAMINASE 10 199 - -
Lal6g0876 835 PANTHER AMP DEAMINASE 238 834 - -
Lal6g0876 835 Gene3D - 293 814 - -
Lal6g0876 835 SUPERFAMILY Metallo-dependent hydrolases 230 823 IPR032466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0876 Lal-Chr6 6024027 6034492 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0876 K01490 - gmx:100793831 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0876 6 6024027 6034492 Lal6g0876 6 6024027 6034492 ECH