Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0868 ATGTCAAGCATTACCATAGAGCCACTATTCTACCATTGCCACATAGAAAAAACAACAATCCCAATTCATAGTTCAAAACCAAAACCATTCATACCTTTGTTTCTCCATTGTTCTTCTTCCAACTTCAACACCTCAAATGCTTCCTCCTTCTATAGCTTCAAGCAACCCCACAGGTCTAACTCTCTTGCATTTGCAGCTTCTTCAATAGACACAATATCTACCCTTCAATCTTCTCATCATGATGATGCCTTATTTTCCAAGTCTTTCCCAATCAACCAAATCCACATGGTGGAGGGAAAGATTACTGTGAGATTAGAACAAGGGAAGGATTTGAGGACTTGGGAGCTTAGGGTTGGTTGCAATCTACTTGGAAAATGGGTTCTTCATTGGGGAGTTTCTCATGTTGATGATGTTGGAAGGGAATGGGATCAACCACCTTCTAATATGATACCCCCTGAATCTGTTTTGATAAAGGACTACGCAATAGAGACACCCTTGAAGAAGTCATTTTCTTCTGATGAAGGAGATACATTTCATGAAGTCAGGATTGATACTAAACCTAACAATGAAATTTCAGCAATTAATTTTGTTCTCAAGGATGAGGAAACTGGAGTTTGGTATCAAAACATGGGAAGGGATTTCAAGATTCCTTTGCTTGACTTTCTTAAGGAGGATACTAATGTAATTGGACCTAAAGGAGGCCTTAGTTTATGGCCAGGGACTTTGGGGCAGATATCTAACACACTCCACAAATCAGATGCAAATGTTCACAAAGGTCAACAATATAACAGCAGTGAATCCAGAGATTCAAAACAAGAAAATAGTCAACTAGAAGGTTTTTGTGTAGAAATGCCTATTACGAAGAAGGTTTCCATCAACAATTCTGTCAGTATCTCCATTAAGAAATGCTATGAGTCTTGGGCAGTCAAGAATATTTTATATTTCGAGACGGATCTACCTGGAGATATTGTACTTCACTGGGGAGTTTGCAGGGATGATTCCAGAAGGTGGGAAGTCCCACCTGCTCCTCATCCTCCCGAAACGGTCACATTTGAAGACAGAGCTTTGAGAACTCAACTACAGCCAAGAGACAGTGGAAATGGATCTTCAGTACTAATCACTTTGGGCGAAGAATTTTCAGGATTTCTTTTTGTTCTTAAGCAAAATGAAAATACTTGGTTCAAGTACATGGGAAATGACTTTTACATCCCCCTCTCAAGTTCCGGAAGAGAGGACCGGTCAGAAGATGTGAAGAGGGGAGTGAGTGAAGAGGCAGGTCAGGAGAGTTCTTTCTTTGCATTTACTGAAGGAATATTCAATGACATGAGGAATTTGGTGACAGATATATCCTCTGAGAAGAGCCAAAAGAGAAAACCCAAAGAAGCAAAGGAGAGCATCCTTCAAGAAATTGAAAGACTGGCTGCTGAAGCCTTTAATTTCTTCAGAAGCTCTGTCCCAACTTTCTCAGAGGAGGCTGCTGCGGAATATGAGGCTTCTACGGAATCAGAGACATTGACACCTGATCCAAAAGTATGCTCAGGGACAGGAACAGGTTATGAAATAGTATGTCAAGGGTTTAACTGGGAATCTCATAAATCTGGAAGATGGTACAGGGAGCTTAAAGAGAAAGCTTCAGAACTGGCATCACTTGGTTGCACTGTGGTTTGGTTACCACCACCTACAGAATCTGTTTCACCTGAAGGGTACATGCCAAAGGATTTATATAACTTAAATTCCAGATACGGAAACATTGATGAACTTAAGGATTTGGTGAAAACATTTCATGAAGTTGGGATCAAAGCTCTAGGTGATGCTGTTCTAAATCATCGCTGTGCTCATTATCAGAATAACAATGGTATTTGGAACAAGTTTGGAGGCCTTCTCAATTGGGATGATCGTGCAGTTGTTGCTGATGATCCACATTTTCAGGGTAGAGGAAACAAGAGTAGTGGAGATAATTTTCATGCTGCTCCAAACATTGATCATTCACAGGAATTTGTGAGAAAGGATCTCAAAGAATGGTTATGCTGGTTGAGGAAAGAAGTTGGTTATGATGGTTGGAGGCTTGACTTTGCAAGAGGATTTTGGGGAGGTTATGTAAAGGACTACCTGGATGCAAGTGAACCTTACTTTTCTGTAGGAGAGTACTGGGATTCCCTCAGTTATACAAATGGTGAAATGGATCATAATCAAGATGCTCATAGGCAGAGGATAGTTGACTGGATCACTGCCACCAATGGTACTTCTGGTGCATTTGATGTTACAACAAAAGGGATTCTTCACTCTGCATTAGAAAGATGTGAATATTGGCGATTGTCAGATCAGCAGGGAAAACCCCCGGGCGTTATTGGATGGTGGCCATCTCATGCTGTTACCTTTATAGAGAATCATGACACTGGTTCCACCCAGGGTCACTGGAGATTTCCCATTGGAAAAGAAATGCAAGGATATGCATACATCCTTACTCACCCAGGAACCCCATCAGTGTTCTTTGACCACATTTTCTCTCATTATGAAACTGAAATAGAAAAACTTATATCTCTCAGGAAGAGGAACAAAATCCACTGCAGGAGTGTAGTTCAAATTAGTAAGGCGGAAAGGGATGTCTATGCAGCCATCATCGACGAAAAAATTGCTATGAAAATGGGACCTGGACATTTTAAACCTCCCAGTGGCTCCCAAAAATGGTCTTTAGCTATTGAGGGAAGAGACTATAAGATTTGGGAGGCATCATAA 2736 0.409 MSSITIEPLFYHCHIEKTTIPIHSSKPKPFIPLFLHCSSSNFNTSNASSFYSFKQPHRSNSLAFAASSIDTISTLQSSHHDDALFSKSFPINQIHMVEGKITVRLEQGKDLRTWELRVGCNLLGKWVLHWGVSHVDDVGREWDQPPSNMIPPESVLIKDYAIETPLKKSFSSDEGDTFHEVRIDTKPNNEISAINFVLKDEETGVWYQNMGRDFKIPLLDFLKEDTNVIGPKGGLSLWPGTLGQISNTLHKSDANVHKGQQYNSSESRDSKQENSQLEGFCVEMPITKKVSINNSVSISIKKCYESWAVKNILYFETDLPGDIVLHWGVCRDDSRRWEVPPAPHPPETVTFEDRALRTQLQPRDSGNGSSVLITLGEEFSGFLFVLKQNENTWFKYMGNDFYIPLSSSGREDRSEDVKRGVSEEAGQESSFFAFTEGIFNDMRNLVTDISSEKSQKRKPKEAKESILQEIERLAAEAFNFFRSSVPTFSEEAAAEYEASTESETLTPDPKVCSGTGTGYEIVCQGFNWESHKSGRWYRELKEKASELASLGCTVVWLPPPTESVSPEGYMPKDLYNLNSRYGNIDELKDLVKTFHEVGIKALGDAVLNHRCAHYQNNNGIWNKFGGLLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLKEWLCWLRKEVGYDGWRLDFARGFWGGYVKDYLDASEPYFSVGEYWDSLSYTNGEMDHNQDAHRQRIVDWITATNGTSGAFDVTTKGILHSALERCEYWRLSDQQGKPPGVIGWWPSHAVTFIENHDTGSTQGHWRFPIGKEMQGYAYILTHPGTPSVFFDHIFSHYETEIEKLISLRKRNKIHCRSVVQISKAERDVYAAIIDEKIAMKMGPGHFKPPSGSQKWSLAIEGRDYKIWEAS 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0868 911 SMART alpha-amyl_c2 850 910 IPR012850 GO:0004556|GO:0005509|GO:0005975
Lal6g0868 911 SMART aamy 520 855 IPR006047 GO:0005975
Lal6g0868 911 SUPERFAMILY (Trans)glycosidases 519 837 IPR017853 -
Lal6g0868 911 Pfam Alpha amylase, catalytic domain 547 800 IPR006047 GO:0005975
Lal6g0868 911 Gene3D Glycosidases 520 853 - -
Lal6g0868 911 Pfam Alpha-amylase C-terminal beta-sheet domain 851 909 IPR012850 GO:0004556|GO:0005509|GO:0005975
Lal6g0868 911 Gene3D - 854 910 IPR013780 -
Lal6g0868 911 PANTHER ALPHA-AMYLASE 86 911 - -
Lal6g0868 911 SUPERFAMILY Glycosyl hydrolase domain 854 909 - -
Lal6g0868 911 CDD AmyAc_arch_bac_plant_AmyA 521 860 - -
Lal6g0868 911 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 86 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0868 Lal-Chr6 5902839 5910670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0868 1 911 Glycoside Hydrolase AT1G69830 61.889 0.0 1164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0868 K01176 - gmx:100788193 1386.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0868 6 5902839 5910670 Lal6g0868 6 5902839 5910670 ECH