Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0848 ATGGGTACTTCTCTGATGAGATGCTCTCAATCCAACTTTCTCTTCAAAACATTCAAACCTCTCAATTCAATGCTTACCACTTCACTTAATTTCTCTTCCATTCCCATCAACAAAGTTAAGGCGTATGATGCATTGTTGTTGGATGCTGGAGGCACACTTTTGCAATTGGCTAAGCCTGTTCAGGACACTTATGCTGCTATTGGCACCAAATATGGATGGATGTGTTTGCTATGTCTATATTCAGGTTTGACTGTGACTCCAGCCGAGATAAAGCAAGGATTTAAGAGAGCATTTTCTGCTCCATGGCCTGAAAAGCTGCGTTACCAGGGAGATGGGAGACCATTTTGGAAACTTGTAGTTTCTGAAGCCACTGGTTGCCATGATGAAGATTATTTTGAGGAAGTTTACAAGTACTATGCAAAAGGTGATGCTTGGCATCTTCCAGATGGAGCTTATGAAACAATTACTGTTCTCAAGGATGCTGGAGTTAAGATGGCCGTTGTATCCAATTTCGACTCCCGCTTAAGGAAGCTACTGAAGGACCTTAATGTTTTGAATCTGTTTGATGCTGTCATTATATCCTCTGAGGTTGGATATGAAAAACCAGACCCAAGAATATTTCAAGCTGCTCTAGATCAAGTGAAAGTAGAGGCTTGCAAAGCCTTACACATTGGAGATGATGAAAAGGCAGATAAAGTAGGGGCCAGTGGTGTGGGGATAGATTGCTGGTTATGGGGTGTTGATGTGAAGACATTCTCTGAGATACAAATCCATATGCTCAATTCAGAGGCATAG 795 0.4176 MGTSLMRCSQSNFLFKTFKPLNSMLTTSLNFSSIPINKVKAYDALLLDAGGTLLQLAKPVQDTYAAIGTKYGWMCLLCLYSGLTVTPAEIKQGFKRAFSAPWPEKLRYQGDGRPFWKLVVSEATGCHDEDYFEEVYKYYAKGDAWHLPDGAYETITVLKDAGVKMAVVSNFDSRLRKLLKDLNVLNLFDAVIISSEVGYEKPDPRIFQAALDQVKVEACKALHIGDDEKADKVGASGVGIDCWLWGVDVKTFSEIQIHMLNSEA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0848 264 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 45 244 IPR011949 -
Lal6g0848 264 SFLD Haloacid Dehalogenase 42 244 - -
Lal6g0848 264 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 42 244 - -
Lal6g0848 264 PANTHER - 1 263 - -
Lal6g0848 264 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 42 53 IPR006439 -
Lal6g0848 264 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 158 171 IPR006439 -
Lal6g0848 264 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 188 204 IPR006439 -
Lal6g0848 264 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 206 226 IPR006439 -
Lal6g0848 264 PANTHER F14L17.7 PROTEIN 1 263 - -
Lal6g0848 264 CDD HAD_dREG-2_like 151 246 - -
Lal6g0848 264 Pfam Haloacid dehalogenase-like hydrolase 129 242 IPR041492 -
Lal6g0848 264 SUPERFAMILY HAD-like 42 246 IPR036412 -
Lal6g0848 264 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 154 239 IPR006439 -
Lal6g0848 264 Gene3D - 58 140 IPR044924 -
Lal6g0848 264 Gene3D - 46 245 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0848 Lal-Chr6 5718534 5723394 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0848 - - gmx:100306694 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0848 6 5718534 5723394 Lal6g0848 6 5718534 5723394 ECH