Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0705 ATGGCTTCCATATGTTCTCTGAATATGATCTCCTCCCTCAGACTCTCTAACCCAAGTTCTATTTCTACTTCTCAAACCCAAAACCAAGTAGGTTCTACTTTCTTTCACTCCTTCTCAACCAAAAGTTTAAATTTTTCAACTATCCATCAAGTATCTACAAGCAAAAGAAGTTCCAATAACACCACAACCACAGCATTCTTCTCCAAAAATAAGCCCAAGCAGCACCAAGATTCTTCAAAACCAATCAAAGTTCAAGAACTATCTGTGTATGAGATCAATGAACGTGACAGAAGTAGTCCTGCATACCTAAGACTAAGTCAAAAGCCAGAAAACTCACTTGGAGATCTAGTACCATTCAGCAACAAACTCTACTCTGGAGACTTAGAAAAAAGGCTAGGAATAACAGCAGGATTATGTGTACTCATCCAACATGTACCTGAGAAAAAAGGTGACAGATATGAGGCTACATACAGCTTCTACTTTGGAAACTATGGTCACATATCAATTCAAGGACCTTATCTAACATACCAAGATACATATCTGGCTGTAACTGGTGGCTCTGGAATCTTTGAAGGTGTATATGGACAAGTGAAACTTCAGCAACTTGTGTTCCCATTCAAGTTGTTCTATACTTTTTACTTAAAGGGTATTCCTGATTTGCCAACAGAGTTACTAAGGAAGCCAATTCAACCATCACCTCATGTTGAACCATCTCTAGCTGCTAAGGCTGCTGACCCTAATGCCTCTATATTAAACTTTACAAATTGA 768 0.3841 MASICSLNMISSLRLSNPSSISTSQTQNQVGSTFFHSFSTKSLNFSTIHQVSTSKRSSNNTTTTAFFSKNKPKQHQDSSKPIKVQELSVYEINERDRSSPAYLRLSQKPENSLGDLVPFSNKLYSGDLEKRLGITAGLCVLIQHVPEKKGDRYEATYSFYFGNYGHISIQGPYLTYQDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGIPDLPTELLRKPIQPSPHVEPSLAAKAADPNASILNFTN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0705 255 Pfam Allene oxide cyclase 80 253 IPR009410 GO:0016853
Lal6g0705 255 Gene3D - 69 255 IPR044859 -
Lal6g0705 255 MobiDBLite consensus disorder prediction 50 72 - -
Lal6g0705 255 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 5 255 IPR009410 GO:0016853
Lal6g0705 255 SUPERFAMILY Allene oxide cyclase-like 83 255 IPR034871 GO:0009695|GO:0046423
Lal6g0705 255 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 5 255 - -
Lal6g0705 255 MobiDBLite consensus disorder prediction 50 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0705 Lal-Chr6 4635866 4637076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0705 51 255 Acyl Lipid Metabolism Gene Families AT1G13280 65.217 1.15e-96 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0705 K10525 - gmx:100775373 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0705 6 4635866 4637076 Lal6g0705 6 4635866 4637076 ECH
Lal22g1322 22 16112813 16114025 Lal6g0705 6 4635866 4637076 LSH