Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0691 ATGGCCTCACTTTTTCTCCCAACCACTATCGCTGCCACCTCAAATTCCAAAACTACCCTTTCTTTCTATTCCTCTCTCTCCTCCACTTCCTTCCCCTTCCGCCGTTTCTCCGTCGTTAAAACTCGCCGCAGCCAATCCTCCGCAATCCAATCCAAGATCAGAGAAATCTTCATGCCCGCCCTCAGCTCCACCATGACCGAGGGCAAAATCGTCTCTTGGATCAAATCTGAGGGTGACGTTCTCTCCAAAGGTGAGAGTGTCGTTGTTGTCGAGTCCGACAAGGCTGATATGGATGTTGAGACATTTTACGACGGTATCCTCGCCGCCATTGTTGTCGGCGAGGGCGAAACTGCTCCCGTCGGTGCTCCGATCGGTCTTCTCGCCGAGACCGAGGCGGAAGTGGCAGAGGCCAAAGCCAAGGCTGCCAAATCCGCCTCCGCCTCCGCTTCCGCACCCGCCACCACAGCTCCAATTCCTCAGGAAACATCGAATCCTGCTCCGTCTATTTCTCCCCCGCCGTCCAAGGCGGTTTCCGATGGACCGAGGAAGACCGTGGCGACACCTTATGCGAAGAAGATCGCGAAGCAGCATAAGGTGAACATTGAATCGGTGGTTGGGACTGGTCCGTTCGGTCGGGTTACTGCTGCGGATGTTGAGGCCGCCGCCGGAATTACACCGACAGTGAGTAATGTGGCTTCTCCGGCAGTGACTTCAGCTCCACGGAAGGCTGCAGCTGCTCCGGTAGCTTCGACTTCTGCTCCAGCTCCAATTCCAGGTTCTAGTGTTGTTCCCTTCACGACAATGCAATCCGCAGTTGCAAAGAACATGGTGGAGAGTCTCTCTGTGCCTACGTTCCGTGTTGGGTATCCTGTGACCACTGATGCACTTGATGCATTCTATGAGAAGGTGAAACCGAAGGGGGTGACAATGACAGCAATTCTAGCGAAGGCTGCTGCAATGGCACTGGTTCAGCATCCAGTAGTGAATGCCACTTGCAAAGATGGGAAGAGTTTTACATATAATAGTAATATTAACATTGCTGTAGCAGTGGCAATCAATGGTGGTTTGATAACCCCTGTTCTTCCTGATGCAGATAAGTTGGACCTATACCTTTTGTCTAAAAAATGGAAAGAGTTGGTGGACAAAGCTCGGGCTAAGCAATTGCAACCTCGAGAGTATAATTCAGGAACTTTCACACTTTCAAATTTGGGAATGTTTGGAGTTGACAGGTTCGACGCCATACTTCCTCCAGGCCAAGGTGCTATCATGGCTGTTGGAGCATCAAAGCCTACCGTTTTGGCAGATAAGGATGGATTCTTTAGCGTAAAAAATAAAATGCTGGTGAATGTAACTGCCGATCACCGAATAATCTACGGGGCTGAGTTGGCTGCATTCCTTCAGACATTCTCGAAATTTGTTGAAAACCCAGAGAGCTTAACCTTATAG 1446 0.5055 MASLFLPTTIAATSNSKTTLSFYSSLSSTSFPFRRFSVVKTRRSQSSAIQSKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVGEGETAPVGAPIGLLAETEAEVAEAKAKAAKSASASASAPATTAPIPQETSNPAPSISPPPSKAVSDGPRKTVATPYAKKIAKQHKVNIESVVGTGPFGRVTAADVEAAAGITPTVSNVASPAVTSAPRKAAAAPVASTSAPAPIPGSSVVPFTTMQSAVAKNMVESLSVPTFRVGYPVTTDALDAFYEKVKPKGVTMTAILAKAAAMALVQHPVVNATCKDGKSFTYNSNINIAVAVAINGGLITPVLPDADKLDLYLLSKKWKELVDKARAKQLQPREYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVLADKDGFFSVKNKMLVNVTADHRIIYGAELAAFLQTFSKFVENPESLTL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0691 481 CDD lipoyl_domain 55 127 - -
Lal6g0691 481 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 261 480 IPR001078 GO:0016746
Lal6g0691 481 Pfam Biotin-requiring enzyme 55 125 IPR000089 -
Lal6g0691 481 MobiDBLite consensus disorder prediction 143 183 - -
Lal6g0691 481 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 78 107 IPR003016 -
Lal6g0691 481 ProSiteProfiles Biotinyl/lipoyl domain profile. 53 131 IPR000089 -
Lal6g0691 481 SUPERFAMILY Single hybrid motif 52 146 IPR011053 -
Lal6g0691 481 Gene3D - 48 153 - -
Lal6g0691 481 MobiDBLite consensus disorder prediction 147 163 - -
Lal6g0691 481 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 185 222 IPR004167 GO:0016746
Lal6g0691 481 Coils Coil 127 147 - -
Lal6g0691 481 Gene3D - 185 222 IPR036625 GO:0016746
Lal6g0691 481 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 4 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 15 481 - -
Lal6g0691 481 Gene3D - 242 480 IPR023213 -
Lal6g0691 481 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 15 481 IPR045257 GO:0006086|GO:0045254
Lal6g0691 481 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 178 222 IPR036625 GO:0016746
Lal6g0691 481 SUPERFAMILY CoA-dependent acyltransferases 249 479 - -
Lal6g0691 481 Pfam e3 binding domain 185 219 IPR004167 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0691 Lal-Chr6 4550913 4555399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0691 14 481 Acyl Lipid Metabolism Gene Families AT3G25860 75.106 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0691 K00627 - gmx:100813087 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0691 6 4550913 4555399 Lal6g0691 6 4550913 4555399 ECH