Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0671 ATGGCATCAGCGGCAGCAACCACGGTTGTTCTTCCCCATAGGATTCTAACAACCACCACCACCAACGTTGCTCGCTGTTCTATTTTGCCTTATCTCCCTCCTCGCATCTCTTCCTTCTCACCTTCCCTCAAACACTTTCAAGAGTCCCGGAAATCTTCTCTGCTTCAGATCAGAGCTTATTCAGATGAAACTTCTACTTCTCCAGATCCTAATGAGTTGATCACGGATTTGAAGGAAAAGGCAAGAACTTTATTGATTGTGGAAATAATATCCCTAATCTATCATTATCAGTGGGATGCTGTTGAAAACAAGTCTACACTAGTTCTTTATGGTGGTGGCGCTATAGTTTTTGTTTGGCTAACTTCAATTGTTTTGGGTGCTATCAACTCAGTTCCCCTGCTTCCGAAGATTTTGGAGTTGGTAGGACTAGGGTACACTGGATGGTTTGTCTACCGATACCTTCTGTATAAGTCTAGCAGAAAAGAACTTGCTACAGACATTGAAGCACTGAAGAAGAAAATTGCTGGAACTGAATAG 537 0.4246 MASAAATTVVLPHRILTTTTTNVARCSILPYLPPRISSFSPSLKHFQESRKSSLLQIRAYSDETSTSPDPNELITDLKEKARTLLIVEIISLIYHYQWDAVENKSTLVLYGGGAIVFVWLTSIVLGAINSVPLLPKILELVGLGYTGWFVYRYLLYKSSRKELATDIEALKKKIAGTE 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0671 178 Coils Coil 160 178 - -
Lal6g0671 178 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 97 176 IPR025564 -
Lal6g0671 178 PANTHER - 3 81 IPR033344 GO:0009579
Lal6g0671 178 PANTHER - 97 178 IPR033344 GO:0009579
Lal6g0671 178 PANTHER MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED 3 81 - -
Lal6g0671 178 PANTHER MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED 97 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0671 Lal-Chr6 4405478 4407735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0671 - - gmx:100305578 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0671 6 4405478 4407735 Lal6g0671 6 4405478 4407735 ECH
Lal6g0671 6 4405478 4407735 Lal22g0606 22 4256524 4258991 LSH