Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0665 ATGAGAACATTTTTATGTTCAGCATCAACATTTGTTTCTTCAAACATGTCCGAGAAAAAGAGAAAATTGGCACATGGAAAGGGAAAGGTGAAAGTGAGAGACATAAAAGACTCTTTTTCCTCCTTCACCATACAAGAGTCCTTCAAACTTAGGGTAGGGTTGTTGAATTGGTATGACCATAACCACAGGGAACTCCCTTGGAGGAAGACCTTCAAAGAAGAAGAAGAAAAAGAAGTACTTCAAAACAATGCATATGGGGTTTGGGTTTCTGAAGTAATGTTGCAGCAAACACAAGTTCAAACTGTTATTCCTTATTACAACCGTTGGATGCTTAAATGGCCTACTATTCACCATCTCTCACAAGCTTCTCTTGAGGAAGTAAATGAGATGTGGGCAGGTTTGGGCTACTATCGAAGAGCTCGTTTTCTTTTAGAGGGAGCAAAGCAAGTAGTAGCAGAAGGAGGCAAAATTCCTAAAGTGGCTTCTTTGCTACGAAAGATTCCTGGGATTGGAGACTATACAGCTGGAGCAATTGCCTCTATAGCATTCAACGAGGTGGTACCTGTTGTTGATGGAAATGTCGTAAGGGTGATTGCTAGACTAAAGGCTGTTTCTACAAATCCAAAAAAGTCAGTAACAGTAAAGAGATTTTGGGAATTAGCAGCTGAGGCGGTTGATCCACTCCGTCCTGGGGACTTCAATCAAGCTCTCATGGAACTTGGGGCAACTGTATGCACCCCCTTGAACCCAAGCTGCTCCTCATGTCCAGCATCAGAAATTTGTCAAGCGCTGTCAATTTCAAAATGTGATAGTTCTGTAGCAGTTACAGATTATCCCATTAAGGTTGTCAAGGCTAAACAAAGACGTGATTTTTCTGCTGTGTGTGCTGTTGAGTTGATCGGACTTGATACAACGTTAGACGAAAACCCGTCCACCAGCAAATTTATTCTTGTAAAAAGGCCTGATGAAGGATTGCTTGCTGGTCTCTGGGAGTTTCCATCTGCCCCTCTAGATGGAGAAACCGTTTCATTGGCTAGAAGAAAAGCAGTCAATCAGTTCTTGAAAAACGTTCTCAAAATTGACACCAGAAAGACTTGCAATATAGTTTCGAGGGAAGATGTTGGGGAATTTGTTCACATTTTCAGTCACATTCGCCTCAAGTTGTATGTTGAATTGCTAGTTTTGCAGTTTAAAGGGGGAGTAGATGGTTTCCTCAAAAGCCAGGAAAATGAAATTACAACTTGGAAATGTGTTGACAGCAATTCACTTTCAAGCATGGGACTGACGTCAAGTGTCAGAAAGGTGTACAGCATGGTTCAAAAATTTAAGCAGAAAAGTTTTCCTTCTAAGCATGTGCCAACGAAAAAGAGAAACTAA 1377 0.4118 MRTFLCSASTFVSSNMSEKKRKLAHGKGKVKVRDIKDSFSSFTIQESFKLRVGLLNWYDHNHRELPWRKTFKEEEEKEVLQNNAYGVWVSEVMLQQTQVQTVIPYYNRWMLKWPTIHHLSQASLEEVNEMWAGLGYYRRARFLLEGAKQVVAEGGKIPKVASLLRKIPGIGDYTAGAIASIAFNEVVPVVDGNVVRVIARLKAVSTNPKKSVTVKRFWELAAEAVDPLRPGDFNQALMELGATVCTPLNPSCSSCPASEICQALSISKCDSSVAVTDYPIKVVKAKQRRDFSAVCAVELIGLDTTLDENPSTSKFILVKRPDEGLLAGLWEFPSAPLDGETVSLARRKAVNQFLKNVLKIDTRKTCNIVSREDVGEFVHIFSHIRLKLYVELLVLQFKGGVDGFLKSQENEITTWKCVDSNSLSSMGLTSSVRKVYSMVQKFKQKSFPSKHVPTKKRN 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0665 458 CDD ENDO3c 85 241 IPR003265 GO:0006284
Lal6g0665 458 ProSitePatterns Endonuclease III family signature. 155 184 IPR004036 -
Lal6g0665 458 Gene3D - 50 263 IPR023170 -
Lal6g0665 458 PANTHER ADENINE DNA GLYCOSYLASE 24 446 IPR044298 GO:0006284|GO:0016798
Lal6g0665 458 SUPERFAMILY Nudix 279 439 IPR015797 -
Lal6g0665 458 SUPERFAMILY DNA-glycosylase 54 264 IPR011257 GO:0003824|GO:0006281
Lal6g0665 458 CDD DNA_Glycosylase_C 314 436 IPR029119 -
Lal6g0665 458 Gene3D Hypothetical protein; domain 2 64 188 - -
Lal6g0665 458 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 284 446 - -
Lal6g0665 458 SMART endo3end 93 243 IPR003265 GO:0006284
Lal6g0665 458 Pfam HhH-GPD superfamily base excision DNA repair protein 89 221 IPR003265 GO:0006284
Lal6g0665 458 Pfam NUDIX domain 314 436 IPR029119 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0665 K03575 - gmx:100818278 652.514