Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0629 ATGACCAACTTAGTCACCTCATTTATGTTGTGGTTGAGTATGGTATCTACTATCTACAATGTGAAACTTATGGTATATGGAAGTACCAGGGGAGAATTAACTAGGTTCTATGACTTCAAGGTACAAACTAAAACAATTACCAAGCTTTGCTCTTCCAAAGACATTGTCACAATTAATGGTATGTTTCCGGGGCCTGTAGTTTATGCCCAGGAAGATGATAGAATCATAGTCAAAGTTACTAATAAGACACCTTTCAATGTAACAATTCACTGGCATGGTGTCCGACAAAAACTATCATGCTGGTATGATGGGCCATCCTTTATTACACAATGTCCAATTCAAGCAGGTCAAAGTTTTACTTACAATTTTACAGTGGTGAAGCAGAAGGGCACTTTCTTCTGGCATGCTCATGTTTCTTGGCTAAGAGGAACAGTTTATGGGGCCATGATTGTTTATCCAAAGACCATGGTGCCTTACCCATTTAAGGTTCCCTATCAAGAGCACATAATCATACTAGGAGAGTACTGGTTGCAGGATCTCCAACACATTGAGAAAGCCACTCTAGCAAGTGGGGGAGCTCCTCCTGCAGCAGATGCATATACCATTAATGGTCATCTAGGCCCCAACTACAATTGCTCCACTAATGATATCTACCAGCTTGATGTGATTCCTGGGAAGACCTATTTGTTAAGACTGATTAATGCTGGTTTAAACACTGAAAACTTCTTCGCCATCGCTAATCACACATTAACAATTGTGGAAGCTGATGCTGAATACACAAAACCATTCACTACAGACACAGTGATGCTTGGACCAGGCCAAACATTGAATGTCCTTATCCTAGCTGATCAACCAGTAGAGAAATACTCCATGGTTGTAGCACCTTATAAGTCTGGCAGGTTTATTCAGTATCAAAACGTTTCAGCCATTGCCTACTTCAACTATATAGGAGCTGCACCTGATAACCTATATATACCAGCTAAATTACCTGAACTTGATGATAAACTGGCTGTTAAAACAGTCATGGATGGATTAAGGAGCCTGAATCAAGTCAATGTTTTCAAAGAAATTGATATGAGCTTATTCATCACCATTGGATTGAATGTCCAAAAGTGTCATTCAAAGACACCAAAGCAAAACTGCCAAACCATGAACAATGGTGTCCTGGCAGCTTCAATGAACAATATAAGTTTTGTTCATCCAAATATTTCAATCCTAGAAGCTTATTATAAGAAGATAAAAGGATCATATACTGAAGATTTCCCTGATGTGCCCCCTAAGTTCTATGACTTTGTTTATGGTGCACCTAATAACATAACATATGACACACAGTCATTGAATGGTACTAGAACAAAGGTCCTCAAATATGGTAGCAGGGTGCAAATCATTCTGCAAGATACAGGAACAGTCAACATTGAAAACCATCCAATTCACTTTCATGGCTACAGCTTTTATGTAGTAGGGTATGGCACCGGGAACTATAACCCACTAACTGCACAGTTCAACTTAGTAGATCCTCCATACATGAACACAATTGGAGTTCCAGTGGGTGGATGGGCAGTAATTCGCTTTGTTGCTGATAATCCAGGGGCGTGGTATATGCACTGCCACATTGAGATACACCAATCATGGGGACTAGGAATGGTATTTATAGTGAAAAATGGAAAAGGAGAGCTGGAATCCTTACCACATCCTCCACCAGACCTGCCAAGATGTTAA 1719 0.4002 MTNLVTSFMLWLSMVSTIYNVKLMVYGSTRGELTRFYDFKVQTKTITKLCSSKDIVTINGMFPGPVVYAQEDDRIIVKVTNKTPFNVTIHWHGVRQKLSCWYDGPSFITQCPIQAGQSFTYNFTVVKQKGTFFWHAHVSWLRGTVYGAMIVYPKTMVPYPFKVPYQEHIIILGEYWLQDLQHIEKATLASGGAPPAADAYTINGHLGPNYNCSTNDIYQLDVIPGKTYLLRLINAGLNTENFFAIANHTLTIVEADAEYTKPFTTDTVMLGPGQTLNVLILADQPVEKYSMVVAPYKSGRFIQYQNVSAIAYFNYIGAAPDNLYIPAKLPELDDKLAVKTVMDGLRSLNQVNVFKEIDMSLFITIGLNVQKCHSKTPKQNCQTMNNGVLAASMNNISFVHPNISILEAYYKKIKGSYTEDFPDVPPKFYDFVYGAPNNITYDTQSLNGTRTKVLKYGSRVQIILQDTGTVNIENHPIHFHGYSFYVVGYGTGNYNPLTAQFNLVDPPYMNTIGVPVGGWAVIRFVADNPGAWYMHCHIEIHQSWGLGMVFIVKNGKGELESLPHPPPDLPRC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0629 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Lal6g0629 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Lal6g0629 572 PANTHER LACCASE-6 18 572 - -
Lal6g0629 572 Gene3D - 165 350 IPR008972 -
Lal6g0629 572 Gene3D - 370 572 IPR008972 -
Lal6g0629 572 Pfam Multicopper oxidase 167 317 IPR001117 -
Lal6g0629 572 TIGRFAM laccase: laccase 34 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lal6g0629 572 SUPERFAMILY Cupredoxins 31 176 IPR008972 -
Lal6g0629 572 CDD CuRO_2_LCC_plant 168 315 IPR034285 -
Lal6g0629 572 PANTHER MULTI-COPPER OXIDASE 18 572 IPR045087 -
Lal6g0629 572 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Lal6g0629 572 Gene3D - 18 153 IPR008972 -
Lal6g0629 572 Pfam Multicopper oxidase 41 154 IPR011707 GO:0005507
Lal6g0629 572 Pfam Multicopper oxidase 442 555 IPR011706 GO:0005507|GO:0016491
Lal6g0629 572 SUPERFAMILY Cupredoxins 357 572 IPR008972 -
Lal6g0629 572 SUPERFAMILY Cupredoxins 164 320 IPR008972 -
Lal6g0629 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0629 Lal-Chr6 4072125 4075073 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0629 K05909 - gmx:100789406 1051.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0629 6 4072125 4075073 Lal6g0629 6 4072125 4075073 ECH