Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0615 ATGGGTAATGGAGAAAAGAGCCCAAGGAGCTTCAATTTGCATCACAATATTCACCACCACCACCACCCTCATCATCACGATGAAAAGAAGAAGCAGGTTCCAAAAGGGTGCATGGCAATTAAGGTGGGTAAAGAAAAGGAGCAACAACGATTCGTGGTGCCTGTGGAGTATTTCAATCACCCACTTTTCATGCAGCTTTTGAAGAGGGCAGAAGAAGAATATGGGTTTGATCAGAAAGGAACCATCACTATTCCTTGCCATGTTGAGGAATTCAGAAACGTCCAGGGCTTGATTGATAGGGAAATTTCTCTGCATCTTGGTCGTGATGATGATAGATTGGATGAAGAGCACTAA 354 0.435 MGNGEKSPRSFNLHHNIHHHHHPHHHDEKKKQVPKGCMAIKVGKEKEQQRFVVPVEYFNHPLFMQLLKRAEEEYGFDQKGTITIPCHVEEFRNVQGLIDREISLHLGRDDDRLDEEH 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0615 117 MobiDBLite consensus disorder prediction 13 29 - -
Lal6g0615 117 MobiDBLite consensus disorder prediction 1 33 - -
Lal6g0615 117 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 12 109 IPR003676 GO:0009733
Lal6g0615 117 Pfam Auxin responsive protein 25 94 IPR003676 GO:0009733
Lal6g0615 117 PANTHER - 12 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0615 Lal-Chr6 3957198 3957683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0615 33 92 Calmodulin-binding Proteins AT5G20810 55.000 9.10e-19 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0615 6 3957198 3957683 Lal6g0615 6 3957198 3957683 ECH
Lal6g0615 6 3957198 3957683 Lal18g1053 18 13560682 13561008 LSH