Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1053 ATGGGTGGTGGAGAAAAGAATCCAAGAAGCTTCAATTTGCATCGCCATCTTCACCACCAACACCATCACAATGAAGGGAAGAAGCAGGTTCCGAAAGGGTGTATGGCAATTAAGGTGGGAAAAGAAGAGCAACATAGATTCGTGGTGCCTGTAGTGTATTTCAACCACCCTCTCTTCATGCAACTTTTGAAGGTGACAGAAGAAGAATATGGGTTTGATCAGAAAGGAACCATCACTATCCCTTGCCATGTTGAGGAATTCAGAAACGTTCAGGGCTTGATTGATAGTGAAATTTCACACCATCATGTTCGTTGCTTTGGTTTATGA 327 0.4281 MGGGEKNPRSFNLHRHLHHQHHHNEGKKQVPKGCMAIKVGKEEQHRFVVPVVYFNHPLFMQLLKVTEEEYGFDQKGTITIPCHVEEFRNVQGLIDSEISHHHVRCFGL 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1053 108 PANTHER - 14 102 - -
Lal18g1053 108 MobiDBLite consensus disorder prediction 1 30 - -
Lal18g1053 108 Pfam Auxin responsive protein 23 90 IPR003676 GO:0009733
Lal18g1053 108 MobiDBLite consensus disorder prediction 12 26 - -
Lal18g1053 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 14 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1053 Lal-Chr18 13560682 13561008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1053 29 102 Calmodulin-binding Proteins AT5G20810 44.595 4.19e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1053 - K14488 pop:7497282 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1053 18 13560682 13561008 Lal18g1053 18 13560682 13561008 ECH
Lal5g0057 5 621270 621620 Lal18g1053 18 13560682 13561008 ECH
Lal6g0615 6 3957198 3957683 Lal18g1053 18 13560682 13561008 LSH