Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0609 ATGGAGCTGGACCAAATCTACTCCTTCCTTGATTCACCCGACAACGATGACGGTGACAAATCTGATATCCCTCACCGTTCCATCGATGATATTCTCAATGACTGTGACACTTCCTCTTCTTCTTCTCCATCACCTTCTCCTCCTCCTTCTCCTAAACCCTCTTTCTCCCTCAATCATTCCCTCACAACCCTAAATTCTCACAATTCGATAAGCTCCAAACCCGGTTCCTTTACTCGCCCGAATGAACCGTATCGGACTAGGCCGTTCTCGTCTCTCTTCGCTGGGGTGAGGTCCAATGCGAAACCTGGTGCGGCGTTGGCGGCTGCTGCTGCCGCTTCTAGATCTGTTCTTACGCCTCATGCCGCCGCCATGAGGAGAGCAGGGAGCGGGTCTTTGCAGAAAGTTGCATCGTCTGTTGCGGGGAGTGTTGAATCCAGTTCGATCATCGGTGCTGCTGCTGGTGATTCTGATGATATTTTTTCTTCAAAAGGTGAATTGGGCGATTCTTGTGATAAATTAGGTGAATTGGGTGATTCTAGTGGTAAATTCGGTGGTTCTCAATCTTCTAGTGTAGGAAGTTTTAATGAGGTAACAACTAAAGTTGAAACTTTTCAGAATAATGATGAGATAAATGATGCAGAATTAGAAACTGAAGTGAATGATTCAATTTCAAAGGCTGATAATATTATTGGCAGTGAGGTTCAGAATGATTATTCTTTAGTGAGTGAGAAGAAGAGTGATTTGGATGAGGATGAACATGATTCTGAGAAGAATATGAATTATGCACCTTTTACTGATAATGATGAAAAACCTGGTGTTACTAATCTTGATATTAGTGATAAGAGTATCAGTGAGAATGGATTGATGATCGAAGCTGTGGAAACAGAAGAACTAGTGAATGGTAGTTGTTGTGTGGAGGACAGTAATAATGAGGTGAATGATGATAACAGTTCGATAAGTCATGATGTTAATGAGCTAGTTGAGGATATACTTAAGGAACTTGAAAGGGGAAGGGACACTGGGAGAGGAGACGAAAAAATAAAGTTTTCAAAGAAGCCACTTGAATTAGCTGAAGAACTGGAGAAGAAGCATGCTTCAACCGGTTTTCATTTGGAAGAGGGTGCTGCTGCCCAGCCAATGAGGCTGGAGGGCGTTCGAAGAGGGTCCACGGCAGTGGGATATTTTGATGCTAATACTGATAATGCTGTCACAAGAGCCATTTCATCCCAAGCTTTCAGGCGTGAACACGGTTCAGCTCAAGTCTTGGCAGTTCATGCCAATTACATTGCCGTAGGAATGACAAAAGGTCTCATTGTTGTAGTACCCAGTAAATATTCCATTTATCATGCTGACAACACTGATGGAAAGATGTTGATGCTTGCTGAACAAGGTGATCGATTACATGCTCCAGTAACTTCCATGTCTTTCAATCAACAAGGAGACTTTCTTTTAGCTGGTTATGGTGACGGTCATGTTACTCTCTGGGATGTACAGAAAGGTGTAGTAGCCAAAGTTATTAGTGGAGAGCATACAGTGCCTGTAGTGCATACACTGTTTCTTGGACAGGATCCTCAGAATACTCGTCAGTTTAAGGCAATTACTGGTGATTGTAAGGGCCTGGTTCTCTTACACAGTTTCTCAGTCGTCCTTTTGCTTAATACATTCAAAATCAAAACTCAGTGTCTTCTTGATGGGCAAAGAACGGGTTTAGTGCTATCAGCTTCACCACTCCTTTCTGATGAATTCAGTGGAAGTGCTTCCATCCCTGCCAGCAGTTTAAGCAGCATGATGGGAGGTGTAGTTGGGGGAGATGCAGGTTGGAAACTCTTCAATGAAGGCTCTTCTTTGGTTGAAGAAGGCGTGGTTGTATTTGTTACCTATCAAACTGCTTTGGTGGTACGACTGACTCCTAAGTTGGAAGTTTATGCTCAACTCTCTAGGCCAGATGGAATTCGGGAGGGTTCCATGCCATATACTGCATGGAAACACATGGCACAAACATGTAGTTCTACTGAGAACAATTCTGCGGAATCTGTTGAAAAAGTTTCGTTGCTTGCAATTGCTTGGGAACAAAAAGTTCAGGTTGCAAAGTTGGTCAAATCAGATTTGAAAGTATATGGGAAATGGACTCTTGAAAGTGCAGCTGTAGGTCTGGCATGGTTGGACGATCAGATGCTGGTAGTTCTTACTTCAACTGGGCAACTTTATTTATTTGCCAAGGATGGTACTGTCATTCACCAAACAAGTTTTGCTGTAGATGGGATTGGAGCCGATGATCTTGTTTCTTATCATACTCACTTCATCAATATATATGGAAATCCTGAGAAAGCTTATCATAACTCTGTTGCTATAAGAGGAGCTTCTATTTATATACTTGGTCCAACACACCTGGTCATTTCTCGTCTTCTCCCTTGGAAAGAGCGTATTATTGTATTGAAGAAAGCAGGTGACTGGATGGGAGCCTTGAACATGGCAATGACTCTTTATGATGGCCATGCTCATGGGGTTGTTGACCTTCCTAGAACCTTGGATGCTGTACATGAGGCCATAATGCCCTTCTCAGTGGAGTTGCTGATATCTTATGTTGATGAAGTGTTCTCCTATATTTCAGTGGCATTCTGCAACCAAATTGGAAAATTGGATCAATCCAATGATTCAAATAGTAGAAACAGTTCAGTGCTTTCTGAGATAAAGGAGCAATACACCCGTGTCGGTGGAGTTGCTGTTGAATTTTGCTGTCATATCAAACGGACAGATATCCTTTTTGACAAAATTTTCTCAAAGTTCATGGATACTCATGTTCAACAGAGAGTGCAGATACTTGATAAAAAATTTCCAGAAACATTTTTGGAGCTTCTGGAACCATATATTTTAAAGGACATGCTTGGATCTCTTCCTCCTGAGATAATGCAAGAACTGGTAGAGTATTATAGCTCCAAAGGTTGGTTGCAGCGGGTTGAGCAATGTGTGCTTCACATGGATATTTCATCCTTGGATTTTAATCAGGTTGTCAAATTATGCCGGGAGCGTGGACTATATAGTGCTCTAGTGTATCTATTTAATAAAGGCTTGGATGATTTTAGGGCACCTCTGGAGGAGCTGTTTGCAGTCTTACAAAATAGCGAAAAGGAAAATGCTACTGCACTCGGGTATAGAATGCTAATTTATCTCAAGTATTGCTTTACAGGTCTTGCTTTTCCACCAGGCCATGGAACCATTCCTCGTACACGTTTACCATCTCTCAGAAAAGAACTTGTAGAGTTTTTGTTAGAGGAATCAAATATGCATAAATCACAAAAAGTTTCAAATTTTGTATCCAAAGGACCCTACCTGAATCTATATCTCCTCTTAGAGTTAGACAGTGAAGCTACGTTGGATGTCCTCAGATCTGCTTTTGTGGATGATGAAATTTCAAATGCCCTCACATCTTCATTGAGTACAGATGATAGCTCTATTGAGGATGCAAAAGTAGAAAATGATAATGTTACTGAAACTCAAAATACTTTGGTTCAGAGCACAGTAGATGCTCTCGTTCAAATAATAGATATGAATGTTGTTCTGACAGATACGACCTCAAGTAGTGGTGATGATGGATTGTTAAAAGAGTGGCCTTCAAAGGACATAGTGTATCTGTTTGAGTTCATTTCATACTATGTTGCTCTCCAAAGAGCTAAAGTCTCAAAAGGTGTGTTGTGTCAAATATTGGAATATTTGACATCAGATAGTTACTTTACAACTAATGTTTCTAGTAGTAGTTCAACTCCAAAAAATAGAGAAAAGCAAGTGCTTGCACTTCTGGAAGTACTGCCAGAGTCAGAGTGGGATAAATCATATGTGCTGGAGCTATGTGAGAGAGCCCAGTATCACCAGGTTTGTGGATTGATTCATACCATCAGACATGAGCCTGTGGCTGCCTTAGATAGTTATATGAATGATGTAGATGAGCCTGTTCATGCGTTCTCCTTCATCAACAGAACATTGTCACAGTTGACTGGCAACAACCATGCTGCAATTCGGTCAGCAGTCATATCTCGAATTCCTGAGTTGGTTGAATTAAGCAGGGAGGGTACATTCCATATGGTTATCAGTCATTTTAGTGATGAAAGTTCGCATATCGTCACTGAACTTCACTCTCATCGAAGAAGTCTTTTCCTTTATTTAAAGACACTCATTGAGCTTCACTTATTTGGCACCCTAGACTTATCTAATTTGAGAAGGGATGGTATTATGAATCCATGTAATGGTAAGCAGGTTAAAGATCACCACCAAGGACTCGGTGATTATTTAGAGAACATTTCTAGTTTCCCCAAGTACATTCGTGAAAATCCGATCCATGTCCCTGATGATCTTATTGAGCTTTACCTTGAGTTATTATGCCAGTATGAAGGGGGTTCAGTTCTCAAGTTTCTCGAAAAGTTTGATAGCTATCGTGTGGAACATTGTTTACGCCTGTGCCAAAAGTATGGCATTATTGATGCTGCTGCATTTTTATTAGAAAGGGTTGGTGATGTTGGTAGTGCTCTTTCACTTACGCTTTCAGATCTGAATGATAAATTTGTTGAGCTTGATGCCGCTGTCGAAACTGTAGTTTCAAGCCAATCCTTGGGTGGTTCTTCCCATGTGGAAGTATTCAACACTGTTTTAAGAATGAAGGAGGTGAATGACATACACAAGTTATTGCATGCCTGCATTGGTCTGTGTCAGCGGAACACTCCTCGTCTAAATCCTGAAGAATCAGAGGCACATTGGTTTAAATTACTTGACTCGTTTTGTGACCCATTGATGGATTCAGATGCTGAAGAGAGAGCAAATGATAGAAACAATTATTTTGGAGTGCTAGCTGGATTAGCTGATTCACAACCGGATAAAGACACCTATAAAAGCAGTTGGAAAATCTCGAAGTCCCGAAATGGTCAAATATTGAGAAAATTGCTATCCCAGTTCATTAAAGATATTGTTGAGGGAATGATAGGTCTTGTTCACCTTCCAGCTATCATGTCCAAACTCCTGTCTGATAATGGTAGTCAAGAATTTGGCGATTTTAAACTCACCATTTTGGGTATGCTGGGAACATATGGCTTTGAAAGAAGAATTTTGGATGCTGCCAAATCCTTGATTGAGGATGACACGTTCTATACTATGAGTTTACTGAAGAAAGGGGCATCTCATGGATATGCTCCCAAGAGTCTAGTGTGCTGTATTTGTAATTGCCTCCTTACAAAGAACTTCATTAGCTCAGGAATTCGAATTTTCAACTGTGGCCATGCAATTCATCTCCAATGTGAAGCTGTGGAAGTTGAGTCATCAAGCAGAGGTTCTTCATTTGGATGCCCCATATGCATGCCTAACCAGAAACCCCTTCCGTCTAGAAATAAATCAGTTGTTGCAGAGAATGGCTTGATCAATAAATTCTCATCAACACACCAATACCCTCATGGAAGTACTGTTCATCCGCATGAAAGCGATTTGTCTGAGAATATGTATGGGCATCATCAACAGATATCGCGGTTTGAGATGTTGAACAGTTTGCAGAAAAATCAGAGATTTATCCAAATAGAAAACTTGCCTCAGTTGAGGCTTGCGCCACCTGCTGTGTACCATGAGAAGGTAAATAAAGTCCCAGGTTTTCTGGCAGGAGAACATAGCAATAGTTTTGCAGTTGTGGAGAAACAAAGTAGAAACAAGCAAAACCGGGAGCTTAGAGTTAAAGGTAAAGAGAAAACAAGTAAGCGGTGA 5736 0.41 MELDQIYSFLDSPDNDDGDKSDIPHRSIDDILNDCDTSSSSSPSPSPPPSPKPSFSLNHSLTTLNSHNSISSKPGSFTRPNEPYRTRPFSSLFAGVRSNAKPGAALAAAAAASRSVLTPHAAAMRRAGSGSLQKVASSVAGSVESSSIIGAAAGDSDDIFSSKGELGDSCDKLGELGDSSGKFGGSQSSSVGSFNEVTTKVETFQNNDEINDAELETEVNDSISKADNIIGSEVQNDYSLVSEKKSDLDEDEHDSEKNMNYAPFTDNDEKPGVTNLDISDKSISENGLMIEAVETEELVNGSCCVEDSNNEVNDDNSSISHDVNELVEDILKELERGRDTGRGDEKIKFSKKPLELAEELEKKHASTGFHLEEGAAAQPMRLEGVRRGSTAVGYFDANTDNAVTRAISSQAFRREHGSAQVLAVHANYIAVGMTKGLIVVVPSKYSIYHADNTDGKMLMLAEQGDRLHAPVTSMSFNQQGDFLLAGYGDGHVTLWDVQKGVVAKVISGEHTVPVVHTLFLGQDPQNTRQFKAITGDCKGLVLLHSFSVVLLLNTFKIKTQCLLDGQRTGLVLSASPLLSDEFSGSASIPASSLSSMMGGVVGGDAGWKLFNEGSSLVEEGVVVFVTYQTALVVRLTPKLEVYAQLSRPDGIREGSMPYTAWKHMAQTCSSTENNSAESVEKVSLLAIAWEQKVQVAKLVKSDLKVYGKWTLESAAVGLAWLDDQMLVVLTSTGQLYLFAKDGTVIHQTSFAVDGIGADDLVSYHTHFINIYGNPEKAYHNSVAIRGASIYILGPTHLVISRLLPWKERIIVLKKAGDWMGALNMAMTLYDGHAHGVVDLPRTLDAVHEAIMPFSVELLISYVDEVFSYISVAFCNQIGKLDQSNDSNSRNSSVLSEIKEQYTRVGGVAVEFCCHIKRTDILFDKIFSKFMDTHVQQRVQILDKKFPETFLELLEPYILKDMLGSLPPEIMQELVEYYSSKGWLQRVEQCVLHMDISSLDFNQVVKLCRERGLYSALVYLFNKGLDDFRAPLEELFAVLQNSEKENATALGYRMLIYLKYCFTGLAFPPGHGTIPRTRLPSLRKELVEFLLEESNMHKSQKVSNFVSKGPYLNLYLLLELDSEATLDVLRSAFVDDEISNALTSSLSTDDSSIEDAKVENDNVTETQNTLVQSTVDALVQIIDMNVVLTDTTSSSGDDGLLKEWPSKDIVYLFEFISYYVALQRAKVSKGVLCQILEYLTSDSYFTTNVSSSSSTPKNREKQVLALLEVLPESEWDKSYVLELCERAQYHQVCGLIHTIRHEPVAALDSYMNDVDEPVHAFSFINRTLSQLTGNNHAAIRSAVISRIPELVELSREGTFHMVISHFSDESSHIVTELHSHRRSLFLYLKTLIELHLFGTLDLSNLRRDGIMNPCNGKQVKDHHQGLGDYLENISSFPKYIRENPIHVPDDLIELYLELLCQYEGGSVLKFLEKFDSYRVEHCLRLCQKYGIIDAAAFLLERVGDVGSALSLTLSDLNDKFVELDAAVETVVSSQSLGGSSHVEVFNTVLRMKEVNDIHKLLHACIGLCQRNTPRLNPEESEAHWFKLLDSFCDPLMDSDAEERANDRNNYFGVLAGLADSQPDKDTYKSSWKISKSRNGQILRKLLSQFIKDIVEGMIGLVHLPAIMSKLLSDNGSQEFGDFKLTILGMLGTYGFERRILDAAKSLIEDDTFYTMSLLKKGASHGYAPKSLVCCICNCLLTKNFISSGIRIFNCGHAIHLQCEAVEVESSSRGSSFGCPICMPNQKPLPSRNKSVVAENGLINKFSSTHQYPHGSTVHPHESDLSENMYGHHQQISRFEMLNSLQKNQRFIQIENLPQLRLAPPAVYHEKVNKVPGFLAGEHSNSFAVVEKQSRNKQNRELRVKGKEKTSKR 1911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0609 1911 Gene3D - 387 532 IPR015943 GO:0005515
Lal6g0609 1911 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1400 1554 IPR000547 GO:0006886|GO:0016192
Lal6g0609 1911 MobiDBLite consensus disorder prediction 13 32 - -
Lal6g0609 1911 MobiDBLite consensus disorder prediction 1 84 - -
Lal6g0609 1911 ProSiteProfiles Trp-Asp (WD) repeats profile. 471 505 IPR001680 GO:0005515
Lal6g0609 1911 PANTHER - 280 1852 - -
Lal6g0609 1911 MobiDBLite consensus disorder prediction 243 272 - -
Lal6g0609 1911 PANTHER VACUOLAR PROTEIN SORTING VPS41 280 1852 IPR045111 GO:0006623
Lal6g0609 1911 MobiDBLite consensus disorder prediction 171 192 - -
Lal6g0609 1911 MobiDBLite consensus disorder prediction 55 84 - -
Lal6g0609 1911 MobiDBLite consensus disorder prediction 243 259 - -
Lal6g0609 1911 Pfam Region in Clathrin and VPS 1450 1517 IPR000547 GO:0006886|GO:0016192
Lal6g0609 1911 ProSiteProfiles Zinc finger RING-type profile. 1732 1780 IPR001841 -
Lal6g0609 1911 SUPERFAMILY RING/U-box 1726 1783 - -
Lal6g0609 1911 Pfam Golgi CORVET complex core vacuolar protein 8 948 1132 IPR025941 -
Lal6g0609 1911 CDD RING-H2 1732 1781 - -
Lal6g0609 1911 ProSitePatterns Trp-Asp (WD) repeats signature. 483 497 IPR019775 -
Lal6g0609 1911 MobiDBLite consensus disorder prediction 1892 1911 - -
Lal6g0609 1911 MobiDBLite consensus disorder prediction 1889 1911 - -
Lal6g0609 1911 SUPERFAMILY WD40 repeat-like 418 737 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0609 K20178 - gmx:100785710 2640.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0609 6 3914011 3924705 Lal6g0609 6 3914011 3924705 ECH