Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0602 ATGAGTGATAATGGAGAAGAAGCTCCCCGTTCAGCTCCACGTTTGAATGAAAGGATTCTTTCATCTATGTCAAGGAGATCAGTTGCTGCTCATCCTTGGCATGATCTTGAAATTGGACCTGGAGCACCCCACATTTTCAATGTTGTTGTGGAGATCACTAAGGGAAGCAAGGTCAAATATGAACTTGACAAGAAGACTGGATTAATTAAGGTTGATCGAATTTTGTATTCATCGGTTGTTTATCCTCATAACTATGGTTTCATTCCTCGAACTCTGTGTGAAGACAATGATCCAATTGATGTCTTGGTCCTCATGCAGGAGCCAATTCTTCCTGGTACTTTCCTGCGAGCAAGGGCCATTGGACTCATGCCGATGATTGACCAGGGGGAGAAGGATGATAAAATTATTGCAGTGTGTGCTGATGATCCTGAGTATAAGCACTATACTGACTTCAAAGAACTTGCACCTCATCGCCTTATGGAGATTCGGCGCTTCTTTGAAGACTATAAGAGGAATGAGAACAAGGAGGTAGCAGTTAATGATTTTTTGCCACCAGCCACTGCTGTTGAAGCCATCCAACACTCAATGGATCTTTATGCTGAGTACATTCTGCACACCTTAAGACGATAG 630 0.4286 MSDNGEEAPRSAPRLNERILSSMSRRSVAAHPWHDLEIGPGAPHIFNVVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPIDVLVLMQEPILPGTFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDFKELAPHRLMEIRRFFEDYKRNENKEVAVNDFLPPATAVEAIQHSMDLYAEYILHTLRR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0602 209 Gene3D Inorganic pyrophosphatase 27 205 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal6g0602 209 SUPERFAMILY Inorganic pyrophosphatase 25 205 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal6g0602 209 CDD pyrophosphatase 45 197 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal6g0602 209 Hamap Inorganic pyrophosphatase [ppa]. 44 200 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal6g0602 209 Pfam Inorganic pyrophosphatase 48 199 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal6g0602 209 PANTHER BNAC07G03580D PROTEIN 15 208 - -
Lal6g0602 209 PANTHER INORGANIC PYROPHOSPHATASE 15 208 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal6g0602 209 ProSitePatterns Inorganic pyrophosphatase signature. 95 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0602 Lal-Chr6 3868630 3870532 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0602 K01507 - gmx:100500365 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0602 6 3868630 3870532 Lal22g0541 22 3626020 3628970 LSH
Lal6g0602 6 3868630 3870532 Lal18g1064 18 13690289 13693735 LSH