Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0599 ATGGGAGGTAAAAGGAGGAAGAACGATGATTCAGATAACGATGAGGGACAGAAGAAGCCCGAGATTAAGAAATTTAAGAGAGAGGAGCTTCTTCCTTCCATGATCAAGAACAAGGAGAAGAGATCTGAAATTCATGCTAAGCTCAAACGCCAGAAGAAACTCGAAAAACGATCAAAACAAAAAGCTCGAGATGCTGCTGAGAAGAGAGCTCTTGAACTCGGTGAAGAGATTCCCGAGAGAATGGTCCCTCGCACTATTGAGAACACTAGGGAACTGGACGAAACTATTTGCAAGCCTGATGATGAAGAGTTATTTGCTGGAAATGATGCTGATGAGTTCAGTTCAATTTTGAAACGGGAACAAACTCCCAAGATATTAATCACCACCAGCCGTTTCAATTCTTCGAGGGGACCTGATTTTATATCAGATTTGCTTTCGGTTATACCAAATGCACATTACTACAAGAGAGGAACCTATGATTTGAAAAAGATTGTAGAATATGCAAAGAATAAGGACTTCACTTCTGTTATAGTTGTTCACACTAACCGGAGGGAACCAGATGCTCTCTTAGTCATTGGCATACCTGATGGCCCTACTGCTCATTTCAAGCTCTCAAAGCTTGTGTTACGCAAGGATTTGAAGAATCATGGAAATCCAACCAGTCACAAACCTGAGCTTGTGCTGAATAACTTCACAACACGTCTAGGGCATCGAGTTGGAAGATTGATACAGTCACTTTTCCCACAAGATCCAGAATTTAAAGGTCGACGGGTTGTCACCTTCCACAACCAAAGAGACTTCATATTCTTCCGGCACCATCGGTACATTTTTGAAACCAGAGAAGTTAAAAAGACTGACTCTAAAGGTAAAAAGGACAAGGAAGGCACAAGTGAGACTGGTCCTGAACGCAAAGCAATTGCCCGTCTTCAGGAATGCGGCCCCCGTTTCACATTGAAGTTGACTAGCTTGCAGCATGGAACATTTGACACCAGAGGTGGAGAATATGAGTGGGTTCACAAGCCGGAAATGGACACAAGCCGAAGGAGGTTCTTCCTGTGA 1059 0.4315 MGGKRRKNDDSDNDEGQKKPEIKKFKREELLPSMIKNKEKRSEIHAKLKRQKKLEKRSKQKARDAAEKRALELGEEIPERMVPRTIENTRELDETICKPDDEELFAGNDADEFSSILKREQTPKILITTSRFNSSRGPDFISDLLSVIPNAHYYKRGTYDLKKIVEYAKNKDFTSVIVVHTNRREPDALLVIGIPDGPTAHFKLSKLVLRKDLKNHGNPTSHKPELVLNNFTTRLGHRVGRLIQSLFPQDPEFKGRRVVTFHNQRDFIFFRHHRYIFETREVKKTDSKGKKDKEGTSETGPERKAIARLQECGPRFTLKLTSLQHGTFDTRGGEYEWVHKPEMDTSRRRFFL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0599 352 SUPERFAMILY Class II aaRS ABD-related 123 326 - -
Lal6g0599 352 Pfam Brix domain 132 321 IPR007109 GO:0006364|GO:0019843
Lal6g0599 352 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 26 352 IPR044281 GO:0006364|GO:0042134
Lal6g0599 352 PANTHER RIBOSOME PRODUCTION FACTOR 1 26 352 - -
Lal6g0599 352 SMART Brix_2 126 323 IPR007109 GO:0006364|GO:0019843
Lal6g0599 352 MobiDBLite consensus disorder prediction 282 304 - -
Lal6g0599 352 MobiDBLite consensus disorder prediction 1 70 - -
Lal6g0599 352 ProSiteProfiles Brix domain profile. 123 329 IPR007109 GO:0006364|GO:0019843
Lal6g0599 352 MobiDBLite consensus disorder prediction 1 44 - -
Lal6g0599 352 Coils Coil 37 69 - -
Lal6g0599 352 Gene3D - 123 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0599 Lal-Chr6 3839191 3843186 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0599 K14846 - gmx:100791194 600.897