Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0588 ATGCGCAAATCTGCTGCACACAGATTCTGGTTTCTACTTCACCACCGCCATCAATATCATCACCCTTCTTCTTTCTCTTCATCTTCTCCATTACCCCACTCTCGCTTTTTGTCTTCTATTCCTTCTCTTTCTTCTATGGATTCTTCATTCCCTGTCACTGCCAATAATATCAATCCCAAGGTTCTGAAGTGTGAATACGCTGTTCGAGGAGAGATTGTCACACTTGCACAGAAATTGCAAGAAGGTTTACAGGCCAACCCAAGCTCTCATCCATTTGATGAGATACTTTACTGCAACATTGGAAATCCCCAGTCACTTGGCCAGCAGCCAATAACTTTTTTCCGCGAGGTTCTTGCATTATGTGACCATCCAGCTATTTTGGACAGATCTGAAACACAGGGTTTATTCAGTACTGACTCAATAGAGCGAGCTTGGACTATTGTGGATCAAATTCCTGGGAGAGCAACTGGCGCCTACAGTCATAGTCAGGGTATTAAGGGCCTGCGTGATGCAATAGCTGCTGGAATTGAAGCCCGTGATGGCTTTCCTGCTGATCCCAATGACATTTTCTTGACAGATGGTGCAAGCCCAGCGGTACATATGATGATGCAATTACTCATAAGATCGGAAAATGATGGTATTCTGTGTCCCATCCCCCAATACCCTCTGTATTCAGCCTCAATTGCCCTCCATGGTGGCACCCTGGTACCTTATTATCTAGATGAAGCAACTGGTTGGGGGTTGGAAATATCTGAACTCAAGAAGCAATTGGAAGATGCCAAGTCCAAGGGCATCAATGTTAGGGCCTTGGTTGTTATAAACCCTGGCAATCCAACTGGACAGGTTCTTTCTGAAGAAAACCAGCGTGAAATAGTAAAATTTTGCAAACTAGAAGGTCTTGTTCTTTTGGCTGATGAGGTATATCAAGAAAACGTTTATGTTCCTGAGAAAACATTTCATTCATTTAAGAAGATATCTCGTTCTGTTGGATATGGCGAGAATGATATCGCCCTAGTATCTTTCCAATCTGTATCCAAAGGCTATTATGGGGAGTGTGGAAAGCGTGGAGGTTATATGGAGGTGACTGGTTTTTCTAGTGAAGTGAGGGAGCAAATATATAAGGTGGCTTCTGTGAATCTTTGTTCGAATATCTCTGGTCAAATTCTCGCAAGCTTGGTCATGAGTCCACCAAAGGTTGGAGATGAGTCCTATGAGTTATACATGGCTGAGAAGGAAGCAATTTTATCCTCCCTCACCAGGCGCGCAAAGACACTTGAAGAGGCTTTTAACAAATTAGAGGGTGTGACATGCAACAAAACAGAAGGGGCAATGTATTTGTTTCCCCGCATTCGCCTGCCTGAAAAGGCAATCAAAGCAGCAGAAGCTCTAAACAAAGCTCCTGACGCCTTCTATTGTGGACGCCTCCTGAATGCTACTGGAGTAGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGTACCTGGCATTTCAGGTGCACCATACTTCCTCAGGAAGATAAAATTCCGGCTATTGCTTCTCGCTTGACGGAGTTCCATGAAAAATTCATGGACGAGTTTCGTGACTGA 1590 0.4415 MRKSAAHRFWFLLHHRHQYHHPSSFSSSSPLPHSRFLSSIPSLSSMDSSFPVTANNINPKVLKCEYAVRGEIVTLAQKLQEGLQANPSSHPFDEILYCNIGNPQSLGQQPITFFREVLALCDHPAILDRSETQGLFSTDSIERAWTIVDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDAKSKGINVRALVVINPGNPTGQVLSEENQREIVKFCKLEGLVLLADEVYQENVYVPEKTFHSFKKISRSVGYGENDIALVSFQSVSKGYYGECGKRGGYMEVTGFSSEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYELYMAEKEAILSSLTRRAKTLEEAFNKLEGVTCNKTEGAMYLFPRIRLPEKAIKAAEALNKAPDAFYCGRLLNATGVVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIASRLTEFHEKFMDEFRD 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0588 529 Gene3D - 157 403 IPR015421 GO:0003824
Lal6g0588 529 Gene3D - 106 156 - -
Lal6g0588 529 PANTHER ALANINE AMINOTRANSFERASE 2 44 528 - -
Lal6g0588 529 Coils Coil 408 435 - -
Lal6g0588 529 SUPERFAMILY PLP-dependent transferases 54 523 IPR015424 -
Lal6g0588 529 CDD AAT_like 142 518 - -
Lal6g0588 529 PANTHER ALANINE AMINOTRANSFERASE 44 528 IPR045088 GO:0008483
Lal6g0588 529 Pfam Aminotransferase class I and II 154 502 IPR004839 GO:0009058|GO:0030170
Lal6g0588 529 Gene3D Aspartate Aminotransferase, domain 1 55 527 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0588 Lal-Chr6 3763580 3769189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0588 K00814 - gmx:100776235 896.73