Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0577 ATGGCTTTGCGAGGGGTTTGGCAACTTCAGAAGCTCATTGTCAGCTTTTCTGATTGGGGTGGAAGCAGCCGAGGTATAAGGATGTGTTTGGGATTGGTAGTTTTTAAAGGACAGAGGGCATTTATGGAGTCTCATTTGCCAGCATTTAAGGAGAAGAATCCTCAATTAGAGGTGATTACTGAGCTAATTCGTGGTCAGCATCCACATCTTAAGGGTTTCTACAAAAACAAAAATCAGCGAGTAGTATGTGTGAAGAATATGGATCCAGAGGAGATACTTCTGCATGCAACCAGGATACGGGATTCATTGGGAAGGAAGGTATTAAAACTGAAGACAAGACACGTAGTCAAACACCCAAGTGTGCAAGGTACATGGACAACTGCTATTAAATTTTAA 396 0.4192 MALRGVWQLQKLIVSFSDWGGSSRGIRMCLGLVVFKGQRAFMESHLPAFKEKNPQLEVITELIRGQHPHLKGFYKNKNQRVVCVKNMDPEEILLHATRIRDSLGRKVLKLKTRHVVKHPSVQGTWTTAIKF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0577 131 PANTHER 39S RIBOSOMAL PROTEIN L43 1 130 IPR039927 GO:0003735|GO:0032543
Lal6g0577 131 SUPERFAMILY Thioredoxin-like 8 102 IPR036249 -
Lal6g0577 131 Pfam Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain 39 88 IPR007741 -
Lal6g0577 131 Gene3D Glutaredoxin 1 130 - -
Lal6g0577 131 SMART L51_S25_CI_B8_2 18 103 IPR007741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0577 Lal-Chr6 3713988 3717173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0577 K17424 - vvi:100254168 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0577 6 3713988 3717173 Lal18g1086 18 13911202 13912768 LSH