Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0572 ATGGCCAAACTGGGAAAGCTAACAAAACTGAAGTCAGCCATCAAGAGGTGGCCATCATTAACCAAGCTCAGCCGCAACAACAGCTGTGTCTCCGCCGCCAGCACTGACTCCAACAAAGGCGGCGCCTCCTTCTCCTCATCCAATGAAGTAGAACAACAACAACAACAACAACATGGACTACTCCACACTATCTATGTTGGCAAGTCTAGACGACAATACCTCGTAAACTCCGACATCATAGACCACCCTGTGTTTCAGGAGCTAGTGGACAAGTCTTGTTCTAATTCTGATGGGGTTGTGGTTTCATGTGAAGTGGTTCTCTTTGAGCACTTGCTGTGGATGCTTGAAACCAATGAGACTCAGATGGGGTCCATGGATGAGTTGGTTCAGTTCTACAATTGTGCATGCTGA 411 0.4745 MAKLGKLTKLKSAIKRWPSLTKLSRNNSCVSAASTDSNKGGASFSSSNEVEQQQQQQHGLLHTIYVGKSRRQYLVNSDIIDHPVFQELVDKSCSNSDGVVVSCEVVLFEHLLWMLETNETQMGSMDELVQFYNCAC 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0572 136 Pfam Auxin responsive protein 19 115 IPR003676 GO:0009733
Lal6g0572 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 134 IPR003676 GO:0009733
Lal6g0572 136 MobiDBLite consensus disorder prediction 31 55 - -
Lal6g0572 136 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR78 4 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0572 Lal-Chr6 3683370 3683780 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0572 - - gmx:100797158 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0572 6 3683370 3683780 Lal22g0517 22 3428246 3428641 LSH
Lal6g0572 6 3683370 3683780 Lal18g1091 18 13950222 13950638 LSH