Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1091 ATGGCCAAACTAGGAATGCTAACAAAGCTTAAGTCAGCCATCAAAAGGTGGCCATCATTAACCAAACTCAGCCGCAACAACAGTTCTGTCTCCGCCGCCAGTACTGACTCCTCCAACAAAGGCACCACCACTGCCACCACCACTACCTCCTCCTCCTCCTCCAATGAAGAACAACAACATAGAGTACTCCACACCGTCTATGTTGGCAAGTCTAGGAGACAGTACCTCGTAAACTCCGACATCATAGACCACCCTGTGTTTCAGAAGCTAGTGGACAAGTCTTGTTCTGATTCTGAAGATGTGTTTGTTTCTTGTGAGGTAGTTTTGTTTGAGCATTTGCTGTGGATGCTTGAGAGCAATGAGACTCAGATGGGGTCCATGGATGAACTTGTTGAGTTCTACAATTGTGCATGCTAA 417 0.4652 MAKLGMLTKLKSAIKRWPSLTKLSRNNSSVSAASTDSSNKGTTTATTTTSSSSSNEEQQHRVLHTVYVGKSRRQYLVNSDIIDHPVFQKLVDKSCSDSEDVFVSCEVVLFEHLLWMLESNETQMGSMDELVEFYNCAC 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1091 138 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR78 5 136 - -
Lal18g1091 138 MobiDBLite consensus disorder prediction 28 60 - -
Lal18g1091 138 Pfam Auxin responsive protein 19 117 IPR003676 GO:0009733
Lal18g1091 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 136 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1091 Lal-Chr18 13950222 13950638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1091 - - gmx:100797158 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0572 6 3683370 3683780 Lal18g1091 18 13950222 13950638 LSH
Lal22g0517 22 3428246 3428641 Lal18g1091 18 13950222 13950638 LSH