Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0566 ATGGACGTTGAAATGGACTCTTCTCCTCACTTATTCGACCCACACAATCTCACTACGAGAGAGAAGTTCCGCAGATACGGGAAGAGGCACTCAAGTTCAGGTGCTTCAGCACATGAAAACTCAGCTTCCAAGCTAAGTGAAACTGGGCTCTTTTATGATGGCCAGAACATTCATAGTCCTACTAATGCAGCACTTTTTCTTGAAAACATTAAACAAGAGGTTGAGGACTTCGAAGAAAAGACTCCATATTCCTCTAGAAGAAGGCTGTCTGCTGATATTCCTGGAATCCCTGGTGTGGATGCTGGTTTTGACTCTGTACGTCACTCGTTAAAAGTTTGTAAGCAAGAGGGTGATTCGTTGGGAGATGGTGCAGAAACAATTTTCACTTTGTTTGCATCTCTACTTGATTCTTCTCTGCAAGGTGCTGCAAGACTGATGCCTTTTCCTGATCTGATACTGAGATTCGAAGATGCATGTCGAAATGTTTCCGAGTCTACCAGGTATGGTTTGAATTTAAGGCATCGGGTTGTTGAAGATAAATTGATGAGGCAGAAGGCCCAATTCTTGCTTGATGAGGCGGCAACATGGTCTCTCCTGTGTTTCCTCTTTTTTCATCTTCCAGTTACTGAAGAACTATCTAAAGATCAAATACTGGTGTCAGAAACCTCTCATGTGGTGGCTTGTGAGTTTGTTGCAGAGGACCATACAGCTCAGTTAAGCCTTCGGATAGTCCAGTGGTTAGAAGGCTTAACTTCTAAGGCACTTGACTTGGAAGCAAAGGTGCGTGGATCTCATGTTGGTAGTTATCTCCCCAGTTCTGGAGTTTGGCATCATACTCAGCGTTACCTAAAGAAAGGAGCTTCTGACGGGAATGTTGTTCATCACCTGGACTTTGATGCTCCAACTCGTGAAAATGCAAATATTCTGCCTGATGACAAGAAACAAGATGAATCTCTTTTAGAAGATCTGTGGACTCTTTTAAGGGCTGGAAGACTAGAAGAGGCATGTGGACTTTGCCGTTCTGCTGGACAGCCATGGAGAGCTGCCTCTCTATGCCCATTTGGCGATTTGGACCAATTTCCTTCCATCGACACTCTGGTGAAGAATGGTAAAAATAGAACTTTACAAGCTGTAGAATTTGAAAGTGGCATTGGTCATCAGTGGCATCTTTGGAAATGGGCTTCATATTGTGCATCAGAGAAAATGGCAGAGCTTGGTGGGAAATATGAAGCAGCTGTATATGCAGCTCAATGTAGCAACCTAAAACAGATGCTTCCACTCTGCACCGACTGGGAGTCAGCATGCTGGGCAATGGCAAAGTCTTGGCTAGATGTTCAAGTGGACCTGGAAGTCACTCGTTCACTGCCAGGGGGAGTTGATCAACTTAGAACTTTCAGCGATGCAATTGATGGAAGCCATGGACTTGCTAATGGTTCCATTGACGCTTCAAATGGACCTGAAAATTGGCCAATTCAAGTTTTGAATCAGCAACCACGACATATCTCATCTCTTCTTCAGAAACTTCATTCAGGGGAAATGATCCATGAAGCTGTTACTAGACAGTGCAAAGAGCAACAGCGACAAGTTCAGATGGCTTTAATGCTAGCGGACATACCACATATACTAGACCTTATATGGTCATGGATAGCACCTTCAGAAGATGATCAAAATGTATTTAGGGCAGTTACTGGCTACTGCATTGAAGGTAATGTTTTATGGCCCCATGGAGATCCTCAAATGATACGATTTGGTGCACATCTTGTCCTTGTGCTTAGATATTTACTTGCTGAGCAAATGAAGGATACCTTCAAAGACAAGATTCTGAGTGTTGGTGATAACATTCTGCACGTGTATGCTCTCTTTCTCTTTTCGAAAGAGCATGAAGAGTTGGTGGGCATATATGCTTCTCAGCTTGCAGCTCACCGCTGTATTGACCTCTTTGTGCATATGATGGAACTTAGGCTGAACAGCAGCATACATGTCAAATACAAGATATTCATTTCGGCTATGGAGTATTTACCATTTTCTTCTGTGGATGATTCTAAGGGAAACTTTGAAGACATTATTGAGAGAATTTTGTTGAGATCGCGAGAGGTCAAGGTCAGCAAATATGATAACCTGTCAGATGTTGCAGAACAGCACAGACTACAGAGTCTTGAAAAAGCTAAAGTCATCCAGTGGCTTTGCTTTACACCACCATCCACAATTACTAATGTCAAAGATGTTAGCGAAAAACTTCTTCTCCGAGCATTAGTACACAGCAACATACTTTTCAGGGAGTTTGCATTAATTTCTATGTGGAGAGTACCAGCAATGCCTATAGGTGCCCACACAGCACTTGGTTTTCTTGCTGAACCCTTGAAACAACTTTCAGATACTCTTGAGATCTCTGAGGATTATAATTTTTCTGAGGATTATAATTTTTCTGAGGATCTGAGGGAGTTCCAAGACTGGCGTGAGTATTACTCCTGTGATGCAACCTATCGCAATTGGCTCAAAATTGAACTAGAGAATGCAGAAGTTTCTATCTCTGAGCTGTCACTGGAGGAAAAGGAAAGGGCCATATCAACTGCTAAGGAAACACTGAATGCATCTCTTTCCCTGCTAGAAAGAAAAGAAACACCTTGGTTAACTTCTACAGATCAAGTATATGAATCTGCTGAACCTGTTTTCCTTGAACTTCATGCCACTGCAATGCTCTGCCTGCCATCTGGGGAGTGTTTATGTCCAGATGCTACTGTATGCACTACACTGATGAGTGCCCTCTACTCTTCAGCTGGTGAAGAGGTTGTCTTAAGTCGACAACTAATGATTAATGTTTCGATATCTTCAAGGGACAATTATTGCATTGATGTTGTTCTTCGTTGCGTAGCAATAGCTGGTGATGGACTTGGACCAAATGATCTCAATAATGGTGGTATTCTTGGCACAGTTATGGCTGCTGGTTTTAAAGGTGAGCTTCCTCGGTTTCAAGCTGGAGTTACGATGGAGATATCTCGATTGGATGCTTGGTATTCTGACAAAGAAGGCACATTAGTGTGTCCGGCAACATACATTGTGAAAGGTCTTTGTCGTAGGTGCTGTCTCCCAGAAGTCATTCTTCGCAGCATGCAAGTTTCTGTTTCTCTCATGGGATCAGGAGTTCTTCCTGATTGCCACGATAAGTTGATTGAACTGGAGTTTTTATTGTTTGAGAGGGAATACTCAATCTGCAAAATGGAACTTGCAGAGGAATGA 3237 0.4272 MDVEMDSSPHLFDPHNLTTREKFRRYGKRHSSSGASAHENSASKLSETGLFYDGQNIHSPTNAALFLENIKQEVEDFEEKTPYSSRRRLSADIPGIPGVDAGFDSVRHSLKVCKQEGDSLGDGAETIFTLFASLLDSSLQGAARLMPFPDLILRFEDACRNVSESTRYGLNLRHRVVEDKLMRQKAQFLLDEAATWSLLCFLFFHLPVTEELSKDQILVSETSHVVACEFVAEDHTAQLSLRIVQWLEGLTSKALDLEAKVRGSHVGSYLPSSGVWHHTQRYLKKGASDGNVVHHLDFDAPTRENANILPDDKKQDESLLEDLWTLLRAGRLEEACGLCRSAGQPWRAASLCPFGDLDQFPSIDTLVKNGKNRTLQAVEFESGIGHQWHLWKWASYCASEKMAELGGKYEAAVYAAQCSNLKQMLPLCTDWESACWAMAKSWLDVQVDLEVTRSLPGGVDQLRTFSDAIDGSHGLANGSIDASNGPENWPIQVLNQQPRHISSLLQKLHSGEMIHEAVTRQCKEQQRQVQMALMLADIPHILDLIWSWIAPSEDDQNVFRAVTGYCIEGNVLWPHGDPQMIRFGAHLVLVLRYLLAEQMKDTFKDKILSVGDNILHVYALFLFSKEHEELVGIYASQLAAHRCIDLFVHMMELRLNSSIHVKYKIFISAMEYLPFSSVDDSKGNFEDIIERILLRSREVKVSKYDNLSDVAEQHRLQSLEKAKVIQWLCFTPPSTITNVKDVSEKLLLRALVHSNILFREFALISMWRVPAMPIGAHTALGFLAEPLKQLSDTLEISEDYNFSEDYNFSEDLREFQDWREYYSCDATYRNWLKIELENAEVSISELSLEEKERAISTAKETLNASLSLLERKETPWLTSTDQVYESAEPVFLELHATAMLCLPSGECLCPDATVCTTLMSALYSSAGEEVVLSRQLMINVSISSRDNYCIDVVLRCVAIAGDGLGPNDLNNGGILGTVMAAGFKGELPRFQAGVTMEISRLDAWYSDKEGTLVCPATYIVKGLCRRCCLPEVILRSMQVSVSLMGSGVLPDCHDKLIELEFLLFEREYSICKMELAEE 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0566 1078 Gene3D - 710 909 - -
Lal6g0566 1078 Pfam Nuclear pore protein 84 / 107 189 888 IPR007252 GO:0005643|GO:0017056
Lal6g0566 1078 Gene3D - 275 425 - -
Lal6g0566 1078 PANTHER NUCLEAR PORE COMPLEX PROTEIN 1 1077 - -
Lal6g0566 1078 PANTHER NUP107-RELATED 1 1077 IPR007252 GO:0005643|GO:0017056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0566 K14301 - gmx:100786552 1816.59