Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0549 ATGGTGAAAATGGTGGGCGTAGATATGACGAAAAGCACTTATTCAGTTAAACTTAGCGCTGTGGCACTCTTCTCCCTCACCTTTCTCATCTTCTTCACTCGTTACTTTCCCACCTACTCTTCCTCTCTCTCCTTCTCCGTCAACTTCATCAACTCCACCGCTCCCTCACCCACCCTTTCTCCACCACCTCCGCCACCTCCACCGAATCAACCTCCACCACCTCCGCCGAGCCAGCCTCCACCACCTCCGCCGAGCCAGCCTCCACCACCTCCGCCGAGCCAGCCTCCACCACCTCCTCCGAACCAGCTTCCACCACCTCCTCCGAACCAGCCTCCACCACCTCCGCCGAACCAGCCTCCACCACCTCCGCCGAACCAGCCTCCACCTCCTCCTCCGAACCAGCCTCCACCACCACCACCGCTGTCGTCGGGGGTGGTGCGGATGGGCTTTCTGGACAGAAACGGGGTAATGAGGGAGGATTTCAAAATCGGTGAGTTGGATGCGGATTTGGTTGATGATTTGAGGAATTGGAGCAATTCAGAAAGGGTGAAGAAAAGTGAGAGTGATAGCGGTTTGGTGAGAGAGAAGGTTGAGAAGTACAAGATATGTGATATGAAAATGGTGGATTATATACCTTGTTTGGATAATGTGGAAGCAATTGCACGGTTGAATCGGAGCGTGAGAGGAGAAAAGTACGAAAGACATTGCCCTGAACAATGGAAGGGTTTGAATTGTTTAGTTCCCAGGCCCAAAGGGTACCGTGCCCCAATCCTTTGGCCTAAGAGTAGAGACGAGGTTTGGTTCAGTAATGTGCCCCATACACGTCTTGTTAAAGACGGCCAACAATGGATATCAATAAAGAAGGATAAAATTGTTTTTCGTGATGGTGGAACACAATTTATTCATGGAGCTGATAAATACTTGGATATAATTTCTGCGATGGTTCCTGACATTGAATTTGGTCACAACACCCGAGTTGCCTTAGACATTGACTGTGGAGTGGCAAGTTTTGGTGCATTTTTGATGAAACGTAACGTGACCACTCTTTCAGTATCATCAAAAGATGTTTATGAAAATCAGATTCAGTTTGCTCTAGAGCGTGGTGTGCCTGCCCTGGTAGAAGTGTTTGCTACACACCGATTATTGTTCCCAAGCCAAGCTTTTGACCTCATACATTGTTCAAGATGTAGAGTTAATTGGACTCATGAAGATGGAATTTTGCTTCTTGAGGCCAATAGGCTTCTTCGAGCAGGTGGTTACTTTGTATGGGCTGCACAGCCTGTCTACAAAAATGAACACACCCTTCAAGAACAATGGAAAGAAATGGTGGACCTGACTACTCGCATTTGTTGGGAACTTGTAAGTAAGGAGGGATATATTGCTATATGGAAGAAACCTATTAACAATAGCTGCTACCTTAGTCGTGACATCGCTGTGGGTCCTCCATTATGTGACTTCAATGATGAACCAGATGATGTTTGGTACGTTGGTCTTAAGGCATGCATCACTCAGTTACCTAGTGGTGGGCATGGAGCAAATGTTACTAAGTGGCCTGCACGCCTTCATCAACCACCAGACAGGCTTCAAAGCATCAAACAGGATGCCATTATATCCAGAACAGAACTCTTTAAGGCCGAATCAACATATTGGAATGAAATAGTAGAAAATTATGTTCGTGTTTACCGTTTGGATACATATAACCTAAGGAATGTAATGGACATGAGGGCAGGATTTGGAGGATTTGCTGCAGCACTGCATGATTTCCATGTTGACTGCTGGGTCATGAATGTTGTTCCTGTTAGTGAATTCAACACTTTGCCAGTCCTATATGACCGCGGTCTGATTGGAGTTATGCATGATTGGTGCGAGCCATTTGATACATACCCAAGAACATATGATTTACTGCATGTAGCAGGTCTCTTTTCTGTTGAGAAAAAGAGGCAAAAGTGTAATATTTCAACCATCATGCTTGAGATGGATCGGATGGTAAGACCGGGTGGGTATGTATTTATACGTGAATCCATACATCTTATTGGTGAATTAGAAGAAATTGCAGCTGCAATGGGATGGACTACTTTCCAGAATATTGTTGGCGAGGGTCCCTATTCAAGGTGGAAGCTATTAAGGTGTGAAAAACGTTTCTGA 2145 0.4587 MVKMVGVDMTKSTYSVKLSAVALFSLTFLIFFTRYFPTYSSSLSFSVNFINSTAPSPTLSPPPPPPPPNQPPPPPPSQPPPPPPSQPPPPPPSQPPPPPPNQLPPPPPNQPPPPPPNQPPPPPPNQPPPPPPNQPPPPPPLSSGVVRMGFLDRNGVMREDFKIGELDADLVDDLRNWSNSERVKKSESDSGLVREKVEKYKICDMKMVDYIPCLDNVEAIARLNRSVRGEKYERHCPEQWKGLNCLVPRPKGYRAPILWPKSRDEVWFSNVPHTRLVKDGQQWISIKKDKIVFRDGGTQFIHGADKYLDIISAMVPDIEFGHNTRVALDIDCGVASFGAFLMKRNVTTLSVSSKDVYENQIQFALERGVPALVEVFATHRLLFPSQAFDLIHCSRCRVNWTHEDGILLLEANRLLRAGGYFVWAAQPVYKNEHTLQEQWKEMVDLTTRICWELVSKEGYIAIWKKPINNSCYLSRDIAVGPPLCDFNDEPDDVWYVGLKACITQLPSGGHGANVTKWPARLHQPPDRLQSIKQDAIISRTELFKAESTYWNEIVENYVRVYRLDTYNLRNVMDMRAGFGGFAAALHDFHVDCWVMNVVPVSEFNTLPVLYDRGLIGVMHDWCEPFDTYPRTYDLLHVAGLFSVEKKRQKCNISTIMLEMDRMVRPGGYVFIRESIHLIGELEEIAAAMGWTTFQNIVGEGPYSRWKLLRCEKRF 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0549 714 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 547 694 IPR029063 -
Lal6g0549 714 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 233 453 IPR029063 -
Lal6g0549 714 Gene3D Vaccinia Virus protein VP39 305 465 IPR029063 -
Lal6g0549 714 PANTHER METHYLTRANSFERASE PMT12-RELATED 127 713 - -
Lal6g0549 714 MobiDBLite consensus disorder prediction 54 146 - -
Lal6g0549 714 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 209 712 IPR004159 GO:0008168
Lal6g0549 714 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 127 713 IPR004159 GO:0008168
Lal6g0549 714 MobiDBLite consensus disorder prediction 56 143 - -
Lal6g0549 714 PRINTS Proline rich extensin signature 60 76 - -
Lal6g0549 714 PRINTS Proline rich extensin signature 80 92 - -
Lal6g0549 714 PRINTS Proline rich extensin signature 95 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0549 Lal-Chr6 3543651 3549974 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0549 - - gmx:100809916 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0549 6 3543651 3549974 Lal6g0549 6 3543651 3549974 ECH