Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0532 ATGACTCCTTACTTTTTTGGAGCCATTCTCGCAGTCACTTTCATCCTCCGCAACTCCAACGCTACCAAACGCCGCCGCGGTATTCCCGTCGACACCGCCAGCGATCCAGGCTTCGCCGTCCGGAATCAACGGTTCACTTCACCGGTTCAAACCTCGTGGGAAGGCGTGACTACACTGGCGGAGCTTTTCGAAGAGGCATGCAAGAAGTACAGCGAGAGGTTATTGTTTGGAACGAGGAAGCTGATATTGAGAGTGGTAGAGAAAAGCGAAGACGGTAGATCGTTCGAGAAGGTTGAGTTAGGAGATTATGAGTGGTTGAGTTACGCTGATGCATTTGAAGCTGTGTCTAGTTTCGCTTCTGGTTTGGCCAGATTGGGACACGCGAGGGAAGAGCGTGTGGCTATTTTTGCTGATACACGTCAGGAGTGGTTTATTGCATTGCAGGGGTGCTTCAGGCGAAATGTGACAGTTGTGACTATGTATGCATCGTTGGGAGAGGAAGCTTTATGTCACTCATTGAATGAGACAGAGGTTACAACTGTAATTTGTGGAAAAAAGGAATTGAGTACACTTGTACGTATTAGCGGACAACTGGACTCAGTGAAACGAGTGATATGCATGGATGATGATATCCCATCTGATACCTCATCTATTGAACATGGCTGGACAATCACCTCCTTCGCTGATGTTGAGAGCCTTGGTAGAGAAAATCCTGTTGGGGCTGATTTACCTCTTTCAGCGGATGTTGCCGTTATAATGTACACAAGTGGAAGTACGGGATTGCCTAAGGGTGTGATGATGACACATGGCAATGTCTTAGCAACAGTCTCTGCTGTTTTGACAATTGTTCCTAACCTTGGGAGTAAGGATATATATCTAGCGTACTTACCAATGGCTCATATCCTTGAATTAGCAGCTGAGAATTTGATGGCAGCTGTTGGAAGTGCTATAGGATATGGATCTCCTTTGACTCTAACTGATACATCAAACAAGATTAAAAAAGGAACGAAGGGGGACGCTACTGTCCTAACGCCAACATTAATGGCAGCTGTGCCAGCAATTCTTGATCGTGTGCGTGATGGAGTGTTCAAGAAGGTAAATGCCACAGGAGGATTAGCAAAGAAGCTGTTTGATTTAGCCTATTCACGTAGGTTGCTTGCAGTTAATGGTAGCTGGTTTGGAGCTTGGGGATTGGAGAAGGCTCTCTGGGATTTTCTTGTGTTTAAAAAGGTCCGAGCAATTCTGGGTGGTCGTATCCGTTTTATACTGTCCGGTGGTGCTCCTCTTTCTGCTGATACCCAGAGATTCATCAATATTTGTTTTGGTGCTCCAATAGGTCAAGGATATGGTCTTACAGAGACTTGTGCTGGTGGGACATTCTCTGATGTTGATGATACATCTGTTGGCCGGGTTGGACCACCTCTTCCATGCTCATTTGTTAAGCTAATCGACTGGCCTGAAGGTGGATATTTAACTAATGACTCACCAATGCCCCGTGGTGAAATTTTAATTGGTGGTCCAAATGTCACTCTTGGGTACTTCAAAAATGAAGATAAGACAAAAGAATCATACAAGGTTGATGAAAGAGGAATGAGGTGGTTCTACACTGGTGACGTAGGGAGGTTTCATGCAGATGGTTGCCTTGAAATCATTGATCGTAAAAAGGACATTGTTAAACTGCAGCATGGGGAATATGTCTCCTTGGGAAAGGTTGAGGCAGCTCTTATTGTCAGCTCCTTTGTGGACAATATTATGTTGCATGCTGATCCATTTCATAGTTACTGTGTGGCACTTGTGGTGGTTTCTCATTACACATTGGAAGATTGGGCTAAAAAGCAAGGAATTGTTTATACGGATATTTCAGAACTGTGTACGAAAGAAGAAACTGTGAAAGAGGTGCATGCATCACTTTTAGAGGAGGGAAAGAAGGCTCGTTTAGAGAAATTTGAGATTCCTGCAAAAATTAAATTGCTTTCTGAACCGTGGACTCCTGAGTCTGGCCTAGTCACTGCTGCTCTCAAGCTCAAGAGAGAGGCCATTAAAAAGTTATTTCATGCAGAACTTTTGGAGTTATATGCTTCATAG 2085 0.4441 MTPYFFGAILAVTFILRNSNATKRRRGIPVDTASDPGFAVRNQRFTSPVQTSWEGVTTLAELFEEACKKYSERLLFGTRKLILRVVEKSEDGRSFEKVELGDYEWLSYADAFEAVSSFASGLARLGHAREERVAIFADTRQEWFIALQGCFRRNVTVVTMYASLGEEALCHSLNETEVTTVICGKKELSTLVRISGQLDSVKRVICMDDDIPSDTSSIEHGWTITSFADVESLGRENPVGADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSAVLTIVPNLGSKDIYLAYLPMAHILELAAENLMAAVGSAIGYGSPLTLTDTSNKIKKGTKGDATVLTPTLMAAVPAILDRVRDGVFKKVNATGGLAKKLFDLAYSRRLLAVNGSWFGAWGLEKALWDFLVFKKVRAILGGRIRFILSGGAPLSADTQRFINICFGAPIGQGYGLTETCAGGTFSDVDDTSVGRVGPPLPCSFVKLIDWPEGGYLTNDSPMPRGEILIGGPNVTLGYFKNEDKTKESYKVDERGMRWFYTGDVGRFHADGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSSFVDNIMLHADPFHSYCVALVVVSHYTLEDWAKKQGIVYTDISELCTKEETVKEVHASLLEEGKKARLEKFEIPAKIKLLSEPWTPESGLVTAALKLKREAIKKLFHAELLELYAS 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0532 694 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
Lal6g0532 694 Pfam AMP-binding enzyme 96 561 IPR000873 -
Lal6g0532 694 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 693 - -
Lal6g0532 694 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 11 693 - -
Lal6g0532 694 Gene3D - 48 553 IPR042099 -
Lal6g0532 694 SUPERFAMILY Acetyl-CoA synthetase-like 55 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0532 Lal-Chr6 3397888 3404716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0532 147 693 Acyl Lipid Metabolism Gene Families AT1G77590 78.428 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0532 K01897 - gmx:100803677 1177.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0532 6 3397888 3404716 Lal6g0532 6 3397888 3404716 ECH