Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0515 ATGTCCATGGCCCGCTCCTTCTATTTCTCACTCACACTCTTTCTCTCTCTCCTTCTCTCTTCAACAACCCAAACCCATCAAAAAGAACTTGACACTCCCATCACCCGTTTCCAAAACTATCTCCGAATCAACACCGCACACCCAACCCCAGACTATTCCTCCGCTGTTGCCTACCTCAAAGCCCAAGCCCAAGCCCTCGGGCTTCACCACCAAACCCTCCAATTTGTCCCCGGAAAGCCCCTCCTCCTGCTCTCATGGCTGGGATCTGACCCTTCCCTCCCTTCAATCCTCCTCAACTCCCATCTTGACTCCGTCCCCGCCGAGCCCAATAAATGGCTCCATCCTCCCTTCTCCGCCCACCGCACCGTCGACGGAAATATCTTCGCCCGCGGTGCCCAGGACGATAAGTGCATCGCCATGCAGTACCTCGAAGCGATTCGTAACCTCAAGGGGCGCGACTTCACCCCCACGCGCTCTGTCCACGTGTCACTCGTCCCTGACGAGGAGATCGGAGGGTTTGACGGTCACGCGAGGTTCGTGGAATCGAAGGAGTTCGATGAATTGAACGTTGGGTTTGCGTTGGATGAAGGGCAGGCTTCGCCTGGGGATGAATTTAGGGTTTTCTATGCGGATAGGTTCCCTTGGGGGTTGAAGATTAAGGCTACGGGGCAACCCGGGCATGGTGCCAGGATGTATGATAATAGTGCAATGGAGAATTTGATGAAGAGTGTTGAAATTGTAAGTAGGTTTAGGGAGAATGAGTTTGATCTTGTTAAGGCTGGGAAAGCTGCAAATTCGGAAGTTGTTTCGGTTAATCCTGTTTATGTTAAAGCTGGGGTTACTTCGGAGAATGGATATGTGATGAATGTGCAACCTTCTGAAGCGGAAGCTGGTTTCGATCTGAGGTTGACCCCTACGACGGATCCCGAGGAAATGAGAAGGAGAATTGCTGCTGAATGGGCACCCGCGGCTAGGAATATGTCATATGAGATAATAGAAAAAGGACCCATTAGAGACCTCTTGGGGCGCCCCTTAATGACTACCACTAATGATTCCAATCCATGGTGGTTACTTTTCAAGCAAGCTATCACATCAGCTGGAGAAAAACTTTCAAAGCCTGAAATCCTAGCTTCAACAACTGATGCTCGATTCATTAGACGAAAAGGAATTCCTGTACTTGGTTTCTCACCAATGAAAAATACTCCCATATTGCTTCATGACCACAATGAGCACCTACAAGAAACCGTATACATGAAGGGGATAGAGGTATACGAGTCTCTGATAAGTTCCTTGAGTTCATTTACAGAAGCATCACATTAA 1320 0.4924 MSMARSFYFSLTLFLSLLLSSTTQTHQKELDTPITRFQNYLRINTAHPTPDYSSAVAYLKAQAQALGLHHQTLQFVPGKPLLLLSWLGSDPSLPSILLNSHLDSVPAEPNKWLHPPFSAHRTVDGNIFARGAQDDKCIAMQYLEAIRNLKGRDFTPTRSVHVSLVPDEEIGGFDGHARFVESKEFDELNVGFALDEGQASPGDEFRVFYADRFPWGLKIKATGQPGHGARMYDNSAMENLMKSVEIVSRFRENEFDLVKAGKAANSEVVSVNPVYVKAGVTSENGYVMNVQPSEAEAGFDLRLTPTTDPEEMRRRIAAEWAPAARNMSYEIIEKGPIRDLLGRPLMTTTNDSNPWWLLFKQAITSAGEKLSKPEILASTTDARFIRRKGIPVLGFSPMKNTPILLHDHNEHLQETVYMKGIEVYESLISSLSSFTEASH 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0515 439 Gene3D - 218 327 - -
Lal6g0515 439 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 132 171 IPR001261 -
Lal6g0515 439 Gene3D - 353 434 - -
Lal6g0515 439 PIRSF ACY-1 23 436 - -
Lal6g0515 439 PANTHER AMINOACYLASE-1 17 437 - -
Lal6g0515 439 SUPERFAMILY Zn-dependent exopeptidases 21 432 - -
Lal6g0515 439 Gene3D Zn peptidases 23 217 - -
Lal6g0515 439 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 27 434 IPR010159 GO:0004046|GO:0005737|GO:0006520
Lal6g0515 439 SUPERFAMILY Bacterial exopeptidase dimerisation domain 216 330 IPR036264 -
Lal6g0515 439 CDD M20_AcylaseI_like 31 432 - -
Lal6g0515 439 Pfam Peptidase family M20/M25/M40 97 429 IPR002933 GO:0016787
Lal6g0515 439 Pfam Peptidase dimerisation domain 215 320 IPR011650 -
Lal6g0515 439 PANTHER PUTATIVE-RELATED 17 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0515 Lal-Chr6 3293933 3298333 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0515 K14677 - gmx:100817383 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0515 6 3293933 3298333 Lal6g0515 6 3293933 3298333 ECH