Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0498 ATGACGAGAAAAAGCAGCACTTGTACAATTTGCGAGAATTTGAATCTTGCTTCGATATGTTCCGTTTGTGTCAACTACAGGTTGAATGAGTATAATGTTTCATTGAAATCGCTGAAAGACCGTAGGGATTCATTGTACTCAAAATTGAACGAAGTTCTTGTCCTCAAGGGAAAGGAAGATGACCAGAATAATTGGAGAGTGCTTCAACATGAAAAGCTTGCAAGGTTGAGGGAGAAGCTCCGTCGTAGTAAAGAACAAGTGATTCAAGGAAGAGCCAAGATAGATACTATATCTACCGATCTGAAACTTAAATTCGAAGTGCTTGAATCTGCCCTTTCTACGTTGGAAAAGAATCGAGTGGAACAACTGGAAAAGTTCTACCCTAATCTTATATGCACTCAGAGCTTAGGGCATGTGGCGATTACCTCAGAGCTTCTTCATAAACAGTCTGTGGTCATAAAACAGATATGCAGGTTGTTTCAACAACGGCGGGTGCTCATAGAGGGAGATAGAAGGGATGGTTCTAGTGGTCAATATGATCAAATTTGCAATGCACGCTTACCAAGAGCACTAGATCCCCACTCTGTTCCATCGGAAGAGCTTTCTGCTTCTTTGGGATACATGGTGCAACTTCTCAATCTTGTTGTTCACAACTTGGCTGCCCCAGTACTCCATAACTCTGGTTTTGCGGGCTCTTGCTCTCGAATATGGCAACGGGATTCTTATTGGGATGCACGTCCTTCCTCGAGGAGCAATGAATATCCTCTATTTATACCTCGACAAAATTATTGCTCAACTAGTGGGGAAAACTCATGGTCGGATAGAAGCTCAAGCAATTTTGGTGTTGCTTCGATGGAATCTGAGAGGAGGCCTCGCCTGGATTCATTGGGGAGTAGTAGCATTAATTATTCTCTAGCTTCTTCACATTCTGTTCAAACACACAAGGATTTGCAGAAAGCGATTTCGCTTTTAAAAAAAAGTGTAGCATGCATCACAGCTTATTGTTACAACTCCTTATGTTTGGATGTCCCTTCTGAGGCATCCACGTTTGAAGCATTTGCGAAGTTATTGGCTACACTGTCATCATCCAAGGAAGTTCGATCTGTTTTTTCCTTAAAAATGCCTCGCTCTAGGACATGTAAGCAAATTCAACAGTTGAACAAATCTGTGTGGAATATGAATTCTGCTATTTCATCAACTACTTTGCTGGAAAGTGCACATTCTGTGCCCACAACGAGAATTGAAAATTATCTGCCAAGTTCTGCTGCCAGTTTTCTTTACACCGCCGATTTATCTGAAGGAAAAAACGAGTGCCTAATTGAAGGTTGGGATATTGTAGAGCATCCCAAGTTTCCTCCCCCACCATCACAGAGCGAAGATGTTGAGCACTGGACTCGAGCTATGTTCATAGATGCTAAAAGGAAGTGA 1428 0.4202 MTRKSSTCTICENLNLASICSVCVNYRLNEYNVSLKSLKDRRDSLYSKLNEVLVLKGKEDDQNNWRVLQHEKLARLREKLRRSKEQVIQGRAKIDTISTDLKLKFEVLESALSTLEKNRVEQLEKFYPNLICTQSLGHVAITSELLHKQSVVIKQICRLFQQRRVLIEGDRRDGSSGQYDQICNARLPRALDPHSVPSEELSASLGYMVQLLNLVVHNLAAPVLHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNYCSTSGENSWSDRSSSNFGVASMESERRPRLDSLGSSSINYSLASSHSVQTHKDLQKAISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLLATLSSSKEVRSVFSLKMPRSRTCKQIQQLNKSVWNMNSAISSTTLLESAHSVPTTRIENYLPSSAASFLYTADLSEGKNECLIEGWDIVEHPKFPPPPSQSEDVEHWTRAMFIDAKRK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0498 475 Coils Coil 66 93 - -
Lal6g0498 475 Pfam Vacuolar sorting 38 and autophagy-related subunit 14 8 366 IPR018791 -
Lal6g0498 475 PANTHER DNA-DIRECTED RNA POLYMERASE II PROTEIN 1 475 - -
Lal6g0498 475 PANTHER UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN 1 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0498 Lal-Chr6 3189650 3197587 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0498 - - gmx:100776426 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0498 6 3189650 3197587 Lal6g0498 6 3189650 3197587 ECH
Lal18g1141 18 14334581 14343113 Lal6g0498 6 3189650 3197587 LSH