Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0488 ATGATGACTAAGTATATCAACAACAAAATATGTCTTGTTAACTTGGTTATCTTATTTTCTCTGTTTTTCTTGTCCCATGGGAGACAAAATCTCGAGTTTCGATTGATAGCTGTTAATCTTGGTGGTTGGTTGGTTACTGAAGGTTCAATCACACCTTCTCTCTTCGATGGTATTCCAAATAAGAAATTTTTGGATGGAACTGCTATACAGTTAAAATCTGTGACAACAGGGAAATATCTGAGTGCAGAGTCTAGAGGTGGAGGAGAAACAGTTCTAGTCGCAAATCGTTCAAATGCTTCGAATTGGGAAACATTTAGATTGTGGAGGTTAAACGATAACACTTTCAGGTTGAGGGTGTACAACAAACAATTTGTGGGGCTGGATGGGATTAACGTTGTTGCTGTTTCCAATATTTCCACTCATTCTGAGACTTTTCATTTTGTTAAGGAAAGTGACAATTCAAGCCGTATTCGAATCAAAACATCCAATGGATACTTCTTGCAGACAAAGACAAAAGAGGTGGTAACTGCTGATATCTCAGAGGTTAATGGATGGAGAGATGATGATCCAACCATTTTTGTATTGAACATCACTTCAACATTGCAAGGCGAATTTCAAGTAACAAATGGTTATGGCCCAAAAAAGGCTCCTCTAGTTATGAAGAAACATTGGAGTACTTTTATTGTTGAAGAAGACTTCAAGTTCATATCAAGTAATGGATTAAATGCAGTTAGAATTCCCGTAGGGTGGTGGATAGCAAGTGATCTAACTCCACCACTGCCTTATGTTAGTGGTTCCTTGAAAGCACTAGACAATGCTTTCTTGTGGGCAAAGAAATATAATTTGAGAATCATCCTTGATCTTCATGCTGGACCCGGTTCTCAAAATGGCTATGATTCCTCCTCCACAAGAGATGGTTTTCAAGAATGGGGGAAAACAGATAAAAACATCCAACAAACAGTACATGTTATAGAGTTCCTAATTGCAAGGTATGCAAATATCTCAAGCTTATATGCAATTGGCCTCTTAAACGAGCCTCGTGCACCAGGTGTGACATTAGAGACATTGAAAAAGTACTATGATGCTGCTTATAAAGTAGTTCGAAAACACTCTTCCACAGTTTATGTAATGTTCACAAATAGGCTTGAAACACCAAATCCTAGGGAACTCTTACCAATTGCAAATGGTCTTTCACGATGTGTGATTGATGTTCACTATTACAACCTCTTTGAATCTATATTTGAAAACATAACTAGTGTGAAGCAGAACATTGATTATATTCGCATCAACCGCGATTCACAGTTGAATTCTATTACAACTTCAAATGGCCCTCTTACCTTTGTAGGTGAATGGGTTGCTGAGTGGAATGCTAAGGGGGCAACAAAAGAGGACTACAAAGCATATGCCAAAATCCAATTGAATGTTTATGAAAAAGCAACGTTAGGGTGGGCTTACTGGACTTTCAGAAGTGTCAGGAACCATTTTAGTCTCGAGTGGATGATCAACAATGGTTATATCAAGCTTTAG 1527 0.3805 MMTKYINNKICLVNLVILFSLFFLSHGRQNLEFRLIAVNLGGWLVTEGSITPSLFDGIPNKKFLDGTAIQLKSVTTGKYLSAESRGGGETVLVANRSNASNWETFRLWRLNDNTFRLRVYNKQFVGLDGINVVAVSNISTHSETFHFVKESDNSSRIRIKTSNGYFLQTKTKEVVTADISEVNGWRDDDPTIFVLNITSTLQGEFQVTNGYGPKKAPLVMKKHWSTFIVEEDFKFISSNGLNAVRIPVGWWIASDLTPPLPYVSGSLKALDNAFLWAKKYNLRIILDLHAGPGSQNGYDSSSTRDGFQEWGKTDKNIQQTVHVIEFLIARYANISSLYAIGLLNEPRAPGVTLETLKKYYDAAYKVVRKHSSTVYVMFTNRLETPNPRELLPIANGLSRCVIDVHYYNLFESIFENITSVKQNIDYIRINRDSQLNSITTSNGPLTFVGEWVAEWNAKGATKEDYKAYAKIQLNVYEKATLGWAYWTFRSVRNHFSLEWMINNGYIKL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0488 508 Gene3D Glycosidases 189 508 - -
Lal6g0488 508 PANTHER FASCIN 8 508 IPR010431 GO:0007015|GO:0051015
Lal6g0488 508 SUPERFAMILY (Trans)glycosidases 34 506 IPR017853 -
Lal6g0488 508 PANTHER PUTATIVE-RELATED 8 508 - -
Lal6g0488 508 Gene3D - 59 187 - -
Lal6g0488 508 SUPERFAMILY Actin-crosslinking proteins 68 185 IPR008999 -
Lal6g0488 508 Pfam Cellulase (glycosyl hydrolase family 5) 221 488 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0488 Lal-Chr6 3122471 3126012 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0488 - - gmx:100790619 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0488 6 3122471 3126012 Lal6g0488 6 3122471 3126012 ECH